Gene Nmar_0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0098 
Symbol 
ID5773369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp87456 
End bp87989 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content29% 
IMG OID641315717 
Producthypothetical protein 
Protein accessionYP_001581436 
Protein GI161527610 
COG category[S] Function unknown 
COG ID[COG4502] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0065858 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGATTG CATTAGATGT TGATGGTGTA CTCGCTGATG TTATATTGTC TTGGCTAAAT 
TATAGTAATT CAATTAGACA AGAAATTAAA AAACATGAAA TTACTGATTG GGATTTTTGG
AAAAAGTTTG AAATTAATCG TTACGATTTC TATACTGAAT TAAGTTCATG TTGGAAGAAT
TGGACTTCAA TTCCTCCTAC TGAAGAAAAT CTAACCTCGA TCACAAAAAA TTTGTCTGAT
ATTGGTCAGG TAGATATTGT CACCGCAAGA GAACGTTCTA CTGATTCTTT TGTAAAGAAT
TGGCTAAAAC ACTACGAAAT TTCTTATGAC AACTATGTTT CAGTAATTGA TGGTCCTATG
AAAGCTGATC TGGATTATGA TGTTTTTATT GACGATTCAC CATTAAATGC ATTAAAATTT
CTACAAAATA AGAAAAAAGT AATTCTATAT TCCCAACCTT GGAATCAACA TATCACTGAA
AAAAATATTC ATCGAATTTC AAAACTTTCT GAAGTGATAA AAAAATTAAA TTAA
 
Protein sequence
MKIALDVDGV LADVILSWLN YSNSIRQEIK KHEITDWDFW KKFEINRYDF YTELSSCWKN 
WTSIPPTEEN LTSITKNLSD IGQVDIVTAR ERSTDSFVKN WLKHYEISYD NYVSVIDGPM
KADLDYDVFI DDSPLNALKF LQNKKKVILY SQPWNQHITE KNIHRISKLS EVIKKLN