Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nmar_0028 |
Symbol | |
ID | 5774181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosopumilus maritimus SCM1 |
Kingdom | Archaea |
Replicon accession | NC_010085 |
Strand | - |
Start bp | 22998 |
End bp | 23549 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 641315645 |
Product | hypothetical protein |
Protein accession | YP_001581366 |
Protein GI | 161527540 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGAGC CATTTGGTTT TGATTTGCCA GATAATTCCA AAGAATTAAC AGATAAAGAA TATGTCAATT TGGTAAATCG AATTAGAGGT AATTTTCTTA GCTATGTTTC AGTTTTAGAT TCAACACTAA CGGTAATTAT TTCAGACTTA TTTTTACGTG ACAAAAATGA TTTTCCGTTG TGGGCAAAAA CTGTATTTGA TGAGGATAGA ACCGCATCTT TTGGAACAAA AATAGTTTGG ATATCAAGAA TAATGAAAAA TCATCAAGAA TTCAAAAAAG AAATTGAGGA AAAAACAAGA ATAAAGATTC AACAAAAACT AAATGAAATT AGAGAAATTA GAAATGATTT TGCACATAAT TTTGCACAGA ACAAAAAGAT CGAATCTGAA AATATAAAAA ATAGAATTAT CAAATTATAT GATTTTGAAG AAGGTATGAC TACACCGAAA TTATTCAAAA TGGAAGAAAT TATGGATTTG ATAAATGACC CATGGATTTT AGAACAACTT GAAAAAATAG AAGCACTAAC CAAAAAAATA AGAGAAAACT AG
|
Protein sequence | MSEPFGFDLP DNSKELTDKE YVNLVNRIRG NFLSYVSVLD STLTVIISDL FLRDKNDFPL WAKTVFDEDR TASFGTKIVW ISRIMKNHQE FKKEIEEKTR IKIQQKLNEI REIRNDFAHN FAQNKKIESE NIKNRIIKLY DFEEGMTTPK LFKMEEIMDL INDPWILEQL EKIEALTKKI REN
|
| |