Gene Nmar_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNmar_0006 
Symbol 
ID5774088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosopumilus maritimus SCM1 
KingdomArchaea 
Replicon accessionNC_010085 
Strand
Start bp5075 
End bp5566 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content31% 
IMG OID641315623 
Producthypothetical protein 
Protein accessionYP_001581344 
Protein GI161527518 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCTG ATGAGAAGAT TCAGGCACAT GTTGTTTCAA TATGGAGAGA ATCAAAAAAA 
TTTCTATCAA TTGGAGGTAA AGAAGGAATG TTGGTTTTAA CTGATAAGCA TCTAATGTTT
ATTCATAAAA CTGAAGCCAA AATGAAATGG TGGAAGGCAA TTACTCAAAG ACAGGTAATT
AATTTTATCA GATCAAAAAA TACCATGATA CGTCATGATG GTTATGATGA AGAAGATTTG
ATGAATGATG TTGAAGATAA AAGAAACACA GAATTATCAT TTGATGATAT TTCCAATATT
AGTTTTGAAG AAAAGACGTG GGGAAGTGTT TTAGAATTAG AATATGAACA AGACGGTAAA
AAAGAGAAAT TTCAATATTC TATTGCCCAA GATTGGGTAA AATATCCAGC AAAAGAGCCC
ACAAAATACA TGAAAGTAGA TTGGGCACCA TTTGTGCAAT ATATTAAAGA CAGACAGAAA
TTTACAAAGT AA
 
Protein sequence
MQPDEKIQAH VVSIWRESKK FLSIGGKEGM LVLTDKHLMF IHKTEAKMKW WKAITQRQVI 
NFIRSKNTMI RHDGYDEEDL MNDVEDKRNT ELSFDDISNI SFEEKTWGSV LELEYEQDGK
KEKFQYSIAQ DWVKYPAKEP TKYMKVDWAP FVQYIKDRQK FTK