| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0002 |
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| Symbol | |
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| ID | 5773897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 1325 |
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| End bp | 2770 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641315619 |
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| Product | DNA polymerase II small subunit |
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| Protein accession | YP_001581340 |
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| Protein GI | 161527514 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1311] Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGG AACTGTCCTT TGCATTAAAC TATGCATTAA ACAAAGGATT CCAGATTCAT
CCAAATGCTT TTAAAATTTT AGAAAATGTC GATGTGAAAA AACTAGAGAA AATAATAAAG
GAAATTGTCA GAGAAAAAAC CAAACAGAAA TTATTTCAAA TCAATCAAGA TGATTTAGAA
ACATATCTTG GAATCAAAGA TGATCCATCC TTAGAAAATG AGGTCAAGGT TTTGCTGGAT
CCTACAGACA AGATAACCAC GGGAGAAGGA GTAAAGGGAT ACAATGCATT GTTTTCTAGT
AGGTTTAACA AACTAAAACG AATAATTTCA GACAGACCAG AGGCTCGAAT GTTAAAATCT
CTGACTTTTG TTAAAAATGA AAGATCTGAA GATGACATGT ATGTCTGTGG TTTGGTAACT
TCAAGAAATA GTGAGAGAAA TGTAACAAAG TTGGTTTTAG AGGATCCTTC AGGCTCATTT
GAGGGGATTA TTTTTGATAC TGAACTTCAA AAGACGGCAG ATACTCTCCT AGTAGACCAA
TTTGTTATGG CAAGAGTTAG TGTAGGAAAG AACTCTGGAT TCATCATAAA GGATTTGATT
TTTCCGGATA TTCCTGATCA GGCCACAAAC AAGTCAGAAT CTGAAGCCTA TGCCGTATTT
TTGTCTGATT TACATATTGG AAGTAAATAT TTCATGGAAG AAGAGTTAAC AGAGTTTTTC
TCTTGGATAT CTAGTCCCGA TCCTACAGCA AAAAAAATCC GATTTATTTT GATTGGAGGA
GATATGGTTG ATGGGGTTGG AATTTACCCA AATCAGAACA AGGAATTAGT TTGTCAAACC
ATAGAGGAAC AGCTTAAAAA AGTTGAAAGT TTGATTGATC AGATTCCAAA AAATATCAAG
ATAATCATAA TGCCTGGAAA CCATGATCCG GGTAGAAGGG CACTCCCTCA ACCAGCAATT
CCAAAGAAGT ATAATTCTGG ATTATGGGAT AGGGAAAATG TCATAATGGT TGGAAACCCT
GCTGTAGTCT CATTAAATGG TGTGAAAGTG ATGATGTTTC ATGGGCAAAG TATTGATGAT
ATTGTAAAGA CTACCCCAGG GCTAAGTTAT GACAAGCCAA CAAATGTGAT GAAGCACCTA
CTTAGGGCCA GACATCTAAG TCCAATTTAT GGCAGCCAGA CGCCAATTGC TCCTGAGATG
CAGGATCTTA TGGTAATTGA AGATATTCCA GATATCTTTC ATGTAGGCCA CGTCCACAAG
GCTCAGTTGG ATATGTACAA GGGTATATTG TTGGTTAATT CAGGCTCTTG GCAGAAACAG
ACACCATTTC AAGCAAGTGT TGGGATGACT CCAAATCCAG GTATTGCTTT ACTGGTTAAT
TTAAAGACCT TTCAGGTTTT CCACCAAAAT TACAATTCTA ATCTAGACAA TATCTTGCAA
AGTTAA
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| Protein sequence | MKKELSFALN YALNKGFQIH PNAFKILENV DVKKLEKIIK EIVREKTKQK LFQINQDDLE
TYLGIKDDPS LENEVKVLLD PTDKITTGEG VKGYNALFSS RFNKLKRIIS DRPEARMLKS
LTFVKNERSE DDMYVCGLVT SRNSERNVTK LVLEDPSGSF EGIIFDTELQ KTADTLLVDQ
FVMARVSVGK NSGFIIKDLI FPDIPDQATN KSESEAYAVF LSDLHIGSKY FMEEELTEFF
SWISSPDPTA KKIRFILIGG DMVDGVGIYP NQNKELVCQT IEEQLKKVES LIDQIPKNIK
IIIMPGNHDP GRRALPQPAI PKKYNSGLWD RENVIMVGNP AVVSLNGVKV MMFHGQSIDD
IVKTTPGLSY DKPTNVMKHL LRARHLSPIY GSQTPIAPEM QDLMVIEDIP DIFHVGHVHK
AQLDMYKGIL LVNSGSWQKQ TPFQASVGMT PNPGIALLVN LKTFQVFHQN YNSNLDNILQ
S
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