Gene Nham_0338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0338 
Symbol 
ID4030494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp367386 
End bp367919 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content56% 
IMG OID637968872 
Productpeptidase U35, phage prohead HK97 
Protein accessionYP_575694 
Protein GI92115965 
COG category[R] General function prediction only 
COG ID[COG3740] Phage head maturation protease 
TIGRFAM ID[TIGR01543] phage prohead protease, HK97 family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.04025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGAATC TCGAGACTGG CGTCGTCCAG CTAGACGTTA AATCTGTCGG CGATGACGGC 
GTATTCTCCG GTTACGCCTC CTTGTTCGGT ATCACCGACT TGGGTCGTGA CATTGTGACT
CGCGGCGCAT TCACCAAGAG CTTGAAGCAA AAATCCGCTT CTCGCGTGAA GATGCTGCGG
GAGCATGACC AGACGGAACC AATCGGAGTC TGGACCGAGA TCGTCGAGGA TACCAAAGGT
CTGCGCGTTT CAGGCCGGCT GGTACTCGAT ACCGTCAAAG GGCGTGAAAC CCACGCTCTC
TTGAAGGCGG GAGCGCTCGA CGGATTGTCG ATCGGCTACC GCACCAAGTC TGCCCGGTTC
GATAAAGCCA AGGGCACTCG AATGCTCGAC GAAGTCGAGT TGCACGAAAT CAGCGTGGTC
ACTTTTCCAA TGCTGCCTTC AGCGACGGTT GAGGCCGTCA AATCCAACGG CCCGACAACG
TTCCGCGCGC TAGTCGACGC CATCAATTCT GCGCGTACCT CCATCAATAG TTAG
 
Protein sequence
MKNLETGVVQ LDVKSVGDDG VFSGYASLFG ITDLGRDIVT RGAFTKSLKQ KSASRVKMLR 
EHDQTEPIGV WTEIVEDTKG LRVSGRLVLD TVKGRETHAL LKAGALDGLS IGYRTKSARF
DKAKGTRMLD EVELHEISVV TFPMLPSATV EAVKSNGPTT FRALVDAINS ARTSINS