Gene Nham_0092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0092 
Symbol 
ID4029631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp107936 
End bp108817 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content64% 
IMG OID637968626 
Productexodeoxyribonuclease III (xth) 
Protein accessionYP_575453 
Protein GI92115724 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.209408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACGC GGGTCAAGCC CGCGTATGAC GGCAAGCAAA CTTGTCGACG GCTTCGCCAG 
AAATCCATGC AGATCACCCT CACGACCTGG AATGTCAATT CGGTGCGGCT GCGCATCGAT
CTCGTTGCGA AGTTTCTGAA AGCGCAACGG CCGGACGTGC TGTGCCTGCA GGAGACCAAA
TGCCCCGACG ACGCCTTTCC GCTGAAACGC TTCCGCCGGC TCGGCTATGA GCACGTCGCG
CTCAACGGGC AGAAGGGCTA TCACGGGGTC GCCGTGGTCT CGAAGCTGCC GTTCGACGCC
AGCAACATCC GCACCTTCTG CGACAAGATC GATTCACGCC ATGTCGGCGT GACCCTCGGC
GGCGAGGCGG GTCTCGCCGC GCCGCTGGTG CTGCACAACT TCTATGTGCC GGCGGGCGGC
GACATTCCCG ACCCCGCGCT CAACCCGAAG TTCGCCCACA AGCTGCAATT CCTCGACGAG
ATGAAAGCCT GCACACCGCT GCATCCGCGC GACGGCGACC GCCATGTCCT GGTCGGCGAC
CTCAATGTCG CGCCGCATGA GCACGACGTC TGGTCGCACA AGCAACTCCT GAAGATCGTC
TCGCACACGC CGGTCGAATG CGAGAAGCTG CTCGGCTTGC AGAGTCACGG CAACTGGGTC
GACATCGCGC GCGCGCGGAT TCCGATGTCG GAGAAAGTCT ATACGTGGTG GAGCTATCGC
GCCGCCGACT GGGTTGCCGC CAATCGCGGC CGCAGGCTCG ATCACATCTG GGTTTCGGAG
GCGCTGCGCG GCGGAATCCG GGACTTCCGC ATCACCCGCG CCGCCCGCGG CTGGGAGCGT
CCGTCCGATC ATGTGCCGGT GACGGCGGTG ATCGAGGTAT GA
 
Protein sequence
MDTRVKPAYD GKQTCRRLRQ KSMQITLTTW NVNSVRLRID LVAKFLKAQR PDVLCLQETK 
CPDDAFPLKR FRRLGYEHVA LNGQKGYHGV AVVSKLPFDA SNIRTFCDKI DSRHVGVTLG
GEAGLAAPLV LHNFYVPAGG DIPDPALNPK FAHKLQFLDE MKACTPLHPR DGDRHVLVGD
LNVAPHEHDV WSHKQLLKIV SHTPVECEKL LGLQSHGNWV DIARARIPMS EKVYTWWSYR
AADWVAANRG RRLDHIWVSE ALRGGIRDFR ITRAARGWER PSDHVPVTAV IEV