| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0081 |
|---|
| Symbol | |
|---|
| ID | 4029620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 95549 |
|---|
| End bp | 96481 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637968615 |
|---|
| Product | thioredoxin-related |
|---|
| Protein accession | YP_575442 |
|---|
| Protein GI | 92115713 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01068] thioredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCATAG TCGAGCAAGG CAGCGGGCCG CCACCGCAGG CGTCGAATCT GATCAGAGAG
ACGACGGCCC AGACCTTCAT GAATGACGTT GTCGAGGAAT CGATGCGCCA GCCGGTGCTG
GTCGATTTCT GGGCGCCGTG GTGCGGACCG TGCCGCCAGC TCACCCCGAT CCTGGAAAAG
GCCGTGCTCG CCGGCGGCGG CAAGGTCAAG CTGGTCAAGA TGAACATCGA CCAGCATCCC
GCCATTTTCC AGCAGCTTGC GGCACAGATC GGCAATCAGT CGATACCGGC GGTTTTTGCC
TTTACCGGCG GGAGACCGGT CGACTACTTT ACGGGCGCGG CGCCCGAGAG TCAGGTCAAT
GCCTTCATCG ACAAGCTGAC GCAGGGCATG GCGGCGCCCG GCGCGCCGAA TATCGAGGAA
ATCCTGCAAG AGGCCGAAGC CGCGCTCGTC GCAGGCGATC CGGCCACTGC GGCCTCGATC
TATGCCGAGG TTGTCGGTTT CGACGCCGCC AATCTTCCAG CGATCGCGGG ACTTGCGCGT
TGCTATGCAA CCACCGGCGC GCTCGACAAA GCCAAGCAGA CACTGGCGCT GGTGCCGGAA
TCGAAGCGCG GCGACGCCGC CGTGGCAACC GTGCAGGCCA TGATCGACCT CGCCGAACAG
GCGAGTTCGC TTGGCCCCGT CGCCGACCTC GAACGGAAAG TGGCAGAAAA CCCGCTCGAT
CATCAGGCGC GATTCGACCT CGCGACCGCG CTGAACGCCA GCGGCAACCG TAACGATGCC
ACCGGTCACC TGCTCGAAAT CGTCAAGCGC GACCGCAAAT GGAACGACGA CGCCGCCCGC
AAGCAGCTCG TGCAATTCTT CGAAGCATGG GGCGCCGCCG ACGAAGCCAC CGTCGAGGGC
CGCAAACGCC TGTCGACGAT CCTGTTTTCC TAG
|
|---|
| Protein sequence | MSIVEQGSGP PPQASNLIRE TTAQTFMNDV VEESMRQPVL VDFWAPWCGP CRQLTPILEK
AVLAGGGKVK LVKMNIDQHP AIFQQLAAQI GNQSIPAVFA FTGGRPVDYF TGAAPESQVN
AFIDKLTQGM AAPGAPNIEE ILQEAEAALV AGDPATAASI YAEVVGFDAA NLPAIAGLAR
CYATTGALDK AKQTLALVPE SKRGDAAVAT VQAMIDLAEQ ASSLGPVADL ERKVAENPLD
HQARFDLATA LNASGNRNDA TGHLLEIVKR DRKWNDDAAR KQLVQFFEAW GAADEATVEG
RKRLSTILFS
|
|---|
| |