| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0067 |
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| Symbol | |
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| ID | 4029643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 78251 |
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| End bp | 79228 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637968600 |
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| Product | signal peptide peptidase SppA, 36K type |
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| Protein accession | YP_575428 |
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| Protein GI | 92115699 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGATTG AGTCCGATGT GATCGTCGAT CGCCGCAGGT TGCGCCGCAA GCTCACCTTT
TGGCGCGTGG CGTCGGTATT GATCGCGATC GCCGCGGTTG TCGCGGTCGG GGCCTATGCC
ACGCCGTGGG GCCGCGCGCT GACCGGCGCG AGCGCGATTC AGCGCGTCAA TATCGAGGGT
CTGATCCGCA ACGATCAGAA TCGCGTCGAG GCGCTGGAGC GGTTGGGTAA GTCGAACGCG
CCCGCGGTCA TCGTGCACAT CAATTCGCCG GGTGGCACCA CCGCCGGGTC CGAACAACTC
TACGATGCCC TGATGCGCCT GAAGGCGAAG AAGCCGATGG TCGTGGTGGT GGATGGGCTC
TGCGCGTCGG GCGGATATAT CGCCGCGCTC GCCTCCGATC ACATCATCGC ACAGCAGACG
GCGCTGGTGG GCTCGATCGG CGTGCTGTTT CAGTATCCGA ATTTCACCGA TCTTCTGAAA
ACGGTCGGGG TCAAGGTCGA AGAAGTGAAA TCGTCGCCGC TGAAGGCGGC CCCGAACGGC
TTTGAGCCGA CCAGCCCGGA GGCGCGGGCC GCCCTCGATG CCCTGGTGAA GGATTCCTAC
GCCTGGTTCC GCGGTCTGGT ACAGACGCGG CGCGGCATGG ACAACGGGCA ACTCGAAAAG
GTCGCCGACG GCCGTGTTTT CACCGGACGG CAGGCGGTCG ACCTCAAGTT GATCGATCAA
CTCGGCGACG AGAAGGCCGC GATCGCGTGG CTTGTGGCCG AGAAGAAGAT CACGCCCGAC
CTTCCGGTGC GCGATTTCAA GCTGTCGCCG CGCTTCGGCG ACATGACGTT TCTGCGCACC
GCCGCCTCAG TGACCTTCGA TGCGCTGGGA TTGAGCAGCA TCGCGCGGCA GGTCGAGCAG
ACCGGCATCG TGCGAGCGGC AGATCGACTG GGCCTCGACG GAATGCTGGC GTTATGGCAG
CCTGCGCCGT CGAATTGA
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| Protein sequence | MSIESDVIVD RRRLRRKLTF WRVASVLIAI AAVVAVGAYA TPWGRALTGA SAIQRVNIEG
LIRNDQNRVE ALERLGKSNA PAVIVHINSP GGTTAGSEQL YDALMRLKAK KPMVVVVDGL
CASGGYIAAL ASDHIIAQQT ALVGSIGVLF QYPNFTDLLK TVGVKVEEVK SSPLKAAPNG
FEPTSPEARA ALDALVKDSY AWFRGLVQTR RGMDNGQLEK VADGRVFTGR QAVDLKLIDQ
LGDEKAAIAW LVAEKKITPD LPVRDFKLSP RFGDMTFLRT AASVTFDALG LSSIARQVEQ
TGIVRAADRL GLDGMLALWQ PAPSN
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