| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0057 |
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| Symbol | |
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| ID | 4029767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 64411 |
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| End bp | 67560 |
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| Gene Length | 3150 bp |
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| Protein Length | 1049 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637968590 |
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| Product | hypothetical protein |
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| Protein accession | YP_575418 |
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| Protein GI | 92115689 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3893] Inactivated superfamily I helicase |
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| TIGRFAM ID | [TIGR02786] double-strand break repair protein AddB, alphaproteobacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGTCC GCAACGTCCC CACGTCAGTG CCGTTTCTGC GCACCGTCAT CACCGCACTG
GTCGACGGCG CACTGATCGA GGGGTTTCGC CCGCGCGCGC AGCCCGAGCG GCTCGCCGAG
GCCACGCTCT ATCTGCCAAC CCGCCGCGCC GGCCGCATGG CGCGCGACAT CTTCCTCGAT
GTGCTGAATG TCGATGCCGT GATCCTGCCG CGCATCGTCG CGCTTGGCGA TATCGACGAG
GATGAACTGG CCTTTGCACA AGCGGCTTCG TCGGCGGAGG CGTTGCAACT GCCTCCGGCG
CTCGACGGGC TGGCACGCCG CCTTGCGCTC GCGCAGCTCA TCGAAGCATG GGCGAGGCAG
TTGAAGCCCG GCGACCCGGC GCAGGCGCCA CTCGTCCTCG GCGGCCCGGC CTCGACGCTG
GCGCTTGCCG ACGACCTCGC GCGGCTGATG GACGACATGG CCACGCGCGG CGTGGACTGG
CGCGCGCTCG ACGCCCTGGT GCCCGACGCG CTCGACAAAT ACTGGCAGCT CACGCTCGAT
TTCCTGAAGA TCGCCCGGGA CTACTGGCCG GCTCATCTTG AGGAAGCCGG CCGGATCGAA
CCGGCGGTGC GGCGCGACCG CCTGATCGAT GCCGAAGCCG CGCGTCTCGC CGCCCATCAT
GGCGGGCCGG TGATCGCGGC CGGCTCCACC GGTTCGATGC CGTCGACCGC GAAACTGCTG
CATGTCATCG CCAGGCTGCC GCACGGCGCG GTGGTGTTGC CGGGGCTTGA CACCGACCTC
GATGACGAGG CGTGGCAACT GATCGGCGGC ATGAGGGACG GCAACGGCGC ATTCACCGCG
CCGCCCGCCG CCGGCCATCC GCAGTTCGCG CTGCATGGAC TGCTCAGGCG CTTCGGCATC
GCGCGCCGCG ACGTGGAAAC GCTCGGCGTT CCCGCGCCAT ACGGGCGCGA GATGCTGACG
TCGGAGGCGA TGCGGCCATC CGAGGCGACG GCGCGGTGGC ACACGCGGCT TGCCGAGCCC
GAGGTCGCGG AGAAAATCGC CGCCGGCATG AAGAACCTCG CGGTGATCGC CGCCGCCAAT
CCGGAAGTGG AAGCGCTCAG CATCGCCGCC GCCATGCGCG AGGCGCGCGA ACTGAACAAG
ACGGCGGCGC TGGTGACCTT CGACCGGGCG CTGGCGCGGC GGGTGATGGC CGCGCTCGGC
CGCTGGAATC TGGCGTTCGA CGATTCCGGC GGCGACGCGC TGATGGACAC GCCTGCGGGA
ATATTCGCGC GGCTCGTCGC AGGCACGGCC TGCAACGGCC TGGAGCCGCC GACGCTGTTG
GCCTTGCTGA AGCATCCGCT GTGCCGGCTC GGCCGGGTGG CCGGCGGATG GTCGCGCGCC
GTCGCGACGC TGGAGCTTGC GATCCTGCGC GGCACCCGGC CGCCGCCGGG CAGCAAGGGT
TTGGCCGACG AGTTCGCGCG ATTTTGCGGC GAACTGGACA AGCTCGATCG CGGCGAGAGT
TCGTCGCTGC ATCGCACCGA GCCCCGCGCA GCGCTGAAAC TCCATCGGCT TGACGAATCT
CGCGCGTTGA TCGCGGCCTT GCGGGACGCG CTCGCGCCGC TCGAAGGCGA CGGCGCATCG
AGGTCGGCGG ACTTCACCGC TTTCGCCGCA CAGCATCGCG AGGCGATCGA CGTGCTGTCG
CGCGACGACC AAGGTGTTGC CGCCGCCTTC GAGGGTCAGC ACGGCCTTGC GCTCGCCGCC
GCGTTCGATG ATTTGCGCAA GGCGGGCGAG CGCAGCGGTC TGACAGTCAA GATCGCCGAC
TATCCCGAGG TGTTCGAGAC CGCGTTCGGC GACCGCATCG TGCGCCGGCC GCAGGCTACA
GCGGCAAGCT TGAGGATCTA CGGTCCGCTC GAAGCGCGTC TCACCCAATG CGACCGCGTC
ATCCTCGGCG GGCTCAATGA AAGCGTCTGG CCGCCCGCGC CGCCAAGCGA TCCCTGGCTC
AGCCGCCCGA TGCGGCACGA ACTCGGGCTC GATCTTCCGG AGCGACGCAT CGGTCTTTCC
GCGCACGACT TCGCGCAACT GCTCGGCGCC GATGATGTCA TCCTCAGTCA TGCCGCCAAG
GCCGGCGGTT CGCCGGCGGT GGCCTCGCGC TTCCTGCACC GGCTCAAAGC CGTCGCCGGC
CCGGAACGCT GGGCAACCGC GCTGCAAGCC GGCACGCGCT ACGTTCAATA CGCCGAAGCG
ATCGACCGGC CGGAGCAGGT CACCCCCGTC GCCCAGCCCG AGCCAAAACC ACCGCGCGCG
GCGCGGCCGA CGCGATTGTC GGTGACCGCG ATCGAGGACT GGCTGCGCGA CCCCTACACC
ATCTATGCCA AACACATTCT GAAGCTCTTG CCGTTAGAGG CCGTCGATAT GCCGCTGTCG
GCGGCCGATC GCGGCTCTGC GATCCACAAT TCGCTCGGCG ATTTCACCAA ACAATATCCA
GCAGCCTTGC CGGAGAACCC CGCGGACGTG TTGCGCGCCA TCGGCGAGAG CCGTTTCGCG
CCGCTGATGC AGCGGCCCGA AGCGCGCGCG CTGTGGTGGC CGCGCTTTCA ACGCATCGCG
GCGTGGTTCG CGGAATGGGA ACAGTCGCGC CGGCCACAAC TTGAGACAAT CGATGCCGAG
ATCCGCGGCG AGATTTCGAT TCCTGTCGCA AGCGATCGCA CATTCCATTT GTCGGCGCGC
GCCGATCGCA TCGAGCATCT CGGCGACGGC CGCTTTACTA TCCTCGACTA CAAGACCGGC
AGCCCGCCGA GCAGCAAGCA GGTGCGGCTC GGGCTGTCCC CGCAGCTCAC GCTGGAATCC
GCGATCCTGC GCGAAGGCGG CTTCGAGGGC ATCCCGGCCG GCGCGTCGGT CAGCGAACTG
GTCTATGTCC GGCTCAGCGG CAACAACCCG CCCGGCGAGC CGCTGCAAGT CAATCTCGAC
AATGGCAAGA CCGACATGCA ATCGCCGGAT CAGGCCGCCG ATCGCGCCCT TGAAGAACTC
AACGCCCTGA TCCGCGCTTT CGACAACGAG CAGCAGGGCT ATCCATCGCT GGACCTGCCG
ATGTGGAAGA CGCGCTACGG CGCTTACGAC GATCTCGCCC GAATCAAGGA ATGGTCGGCG
GCGGGCGGGT TGGGAATCGA GGAATGGTGA
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| Protein sequence | MRVRNVPTSV PFLRTVITAL VDGALIEGFR PRAQPERLAE ATLYLPTRRA GRMARDIFLD
VLNVDAVILP RIVALGDIDE DELAFAQAAS SAEALQLPPA LDGLARRLAL AQLIEAWARQ
LKPGDPAQAP LVLGGPASTL ALADDLARLM DDMATRGVDW RALDALVPDA LDKYWQLTLD
FLKIARDYWP AHLEEAGRIE PAVRRDRLID AEAARLAAHH GGPVIAAGST GSMPSTAKLL
HVIARLPHGA VVLPGLDTDL DDEAWQLIGG MRDGNGAFTA PPAAGHPQFA LHGLLRRFGI
ARRDVETLGV PAPYGREMLT SEAMRPSEAT ARWHTRLAEP EVAEKIAAGM KNLAVIAAAN
PEVEALSIAA AMREARELNK TAALVTFDRA LARRVMAALG RWNLAFDDSG GDALMDTPAG
IFARLVAGTA CNGLEPPTLL ALLKHPLCRL GRVAGGWSRA VATLELAILR GTRPPPGSKG
LADEFARFCG ELDKLDRGES SSLHRTEPRA ALKLHRLDES RALIAALRDA LAPLEGDGAS
RSADFTAFAA QHREAIDVLS RDDQGVAAAF EGQHGLALAA AFDDLRKAGE RSGLTVKIAD
YPEVFETAFG DRIVRRPQAT AASLRIYGPL EARLTQCDRV ILGGLNESVW PPAPPSDPWL
SRPMRHELGL DLPERRIGLS AHDFAQLLGA DDVILSHAAK AGGSPAVASR FLHRLKAVAG
PERWATALQA GTRYVQYAEA IDRPEQVTPV AQPEPKPPRA ARPTRLSVTA IEDWLRDPYT
IYAKHILKLL PLEAVDMPLS AADRGSAIHN SLGDFTKQYP AALPENPADV LRAIGESRFA
PLMQRPEARA LWWPRFQRIA AWFAEWEQSR RPQLETIDAE IRGEISIPVA SDRTFHLSAR
ADRIEHLGDG RFTILDYKTG SPPSSKQVRL GLSPQLTLES AILREGGFEG IPAGASVSEL
VYVRLSGNNP PGEPLQVNLD NGKTDMQSPD QAADRALEEL NALIRAFDNE QQGYPSLDLP
MWKTRYGAYD DLARIKEWSA AGGLGIEEW
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