| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0035 |
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| Symbol | |
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| ID | 4029802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 37219 |
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| End bp | 39465 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637968569 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_575397 |
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| Protein GI | 92115668 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTGGCCAG CGTCCGGCAA TCTTGCGCAT GGTTTTTGCG TCTGGCGTCC GTGCTTTTGT
GAACCCCAGA AAGACAACAA CAAGATGTTC AACAAGCATT CAGTCGAGAT CGACTGGGGC
GGGCGTCCGC TCAAACTCGA AACCGGCAAG ATCGCCCGCC AGGCCGACGG CGCCGTGGTG
GCTACCTACG GCGAGACCGT CGTGCTCGCC ACCGTCGTCG CCGCCAAGAC GCCGCGCGAA
GGCGTCGATT TCCTGCCGCT CACCGTCGAT TATCAGGAGA AGACCTACGC AGCGGGCCGC
ATTCCCGGCG GCTATTTCAA GCGCGAAGGC CGCCCGAGCG AGAAGGAGAC GCTGGTCTCC
CGCCTGATCG ACCGCCCGGT CCGTCCGCTG TTCGCCGACG GCTGGCGCAA TGAGACCCAG
GTGATCGTCA CCGTGCTCTC GCACGACATG GAGAACGATC CCGATGTGCT GGCGATGGTG
GCCGCCTCCG CGGCGCTGAC GCTGTCCGGC GCACCGTTCA GGGGCCCGAT CGGCGCCGCC
CGCGTCGGCT TCATGAACGA CGAATACGTG CTCAACCCGA CGCTCGACGA AATGGTCGAC
ACCCAGCTCG AGCTGGTGGT CGCCGGCACC GCGGACGCCG TTCTGATGGT CGAATCGGAA
GCCAAGGAGC TGAGCGAGGA CATCATGCTC GGCGCCGTGA TGTTCGGCCA CCGTCACTTC
CAGCCGGTCA TCAACGCGAT CATCGAGCTC GCCGAGAAGG CCGCGAAGGA GCCGCGCGAA
GTCAGCCAGG CCGACGACAG CGCGCTCGAA AAGGAGATGC TCGGCCTGAT CGAAGGCGAG
CTGCGCCCGG CCTACGCCAT CGCCGACAAG CAGCAGCGCC AGAATGCCGT TGCCGCGGCC
AAGGCCAAGG TCATCGCGCA TTACTTCCCG GAAGGCCAGG AGCCGAAATA CGACAAGCTC
CGCATCGCCG CCGTATTCAA GCACCTCGAG GCCAAGATCG TCCGCTGGAA CATTCTCGAT
ACCGGCAAGC GCATCGACGG CCGCGACGCC AAGACCGTGC GCAACATCCT CGCCGAAGTC
GGCGTGCTGC CGCGCGCCCA CGGCTCGGCG CTGTTCACCC GCGGCGAGAC CCAGGCGATG
GTCGTGACCA CGCTCGGCAC CGGCGAGGAC GAGCAATACA TCGATGCGTT GTCGGGAACG
TACAAGGAGA CGTTCCTGCT GCACTATAAC TTCCCGCCCT ACTCGGTCGG CGAGACCGGC
CGCCTCGGCA GCACCAAGCG CCGCGAGATC GGCCACGGCA AGCTGGCGTG GCGCGCGATC
CATCCGGTAC TGCCGCCGCA CCACGAGTTT CCCTACACCA TCCGCGTGGT TTCGGAGATC
ACCGAATCCA ACGGCTCGTC GTCGATGGCC TCGGTCTGCG GCGCCTCGCT GTCGCTGATG
GATGCGGGCG TTCCCTTGAA GCGGCCGACG GCGGGCATCG CCATGGGCCT CATTCTCGAA
GGCAGCCGCT ATGCGGTGCT GTCCGACATT CTCGGCGACG AGGACCATCT CGGCGACATG
GACTTCAAGG TGGCGGGCAC CGAGGTCGGC ATCAGCTCGC TGCAGATGGA CATCAAGATC
GCGGGGATCA CCGAGGAGAT CATGAAGGTC GCGCTCGCCC AGGCCAGGGA GGGGCGCATC
CACATCCTCG GCGAAATGGC CAAAGCCCTG ACCAACGCCC GCGCCGAGCT TGGCGAATAC
GCGCCGCGTA TCGAAACCTT CAAGATCCCG ACCGACAAGA TCCGCGAAGT GATCGGCACC
GGCGGCAAGG TGATCCGCGA GATCGTCGAG AAGACCGGCG CCAAGATCAA CATCGAGGAC
GACGGTACCG TGAAGGTGGC GTCGAACGAC GGCGAGGCGA TGAAGGCCGC GATCAAGTGG
ATCAAGTCGA TCGCCTCCGA TCCGGAGGTC GGCCAGATCT ATGAGGGCAC CGTGGTCAAG
GTGATGGAGT TCGGCGCTTT CGTGAACTTC TTCGGCGCCA AGGACGGCCT CGTCCACATC
AGCCAGCTCG CCGCCAACCG CGTGCAGAAG AGCTCCGACA TCGTCAAGGA AGGCGACAAG
GTCAAGGTCA AGCTGCTCGG CTTCGACGAT CGCGGCAAGA CGCGGCTGTC GATGAAGGCG
GTCGATCAGC AGACCGGCGA GGACCTCGAG GCAGCCGGGC ACAAGGCAGA AAAAGCCGAC
GCGCCGCGCG AGGCTGCGGG CGAGTAA
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| Protein sequence | MWPASGNLAH GFCVWRPCFC EPQKDNNKMF NKHSVEIDWG GRPLKLETGK IARQADGAVV
ATYGETVVLA TVVAAKTPRE GVDFLPLTVD YQEKTYAAGR IPGGYFKREG RPSEKETLVS
RLIDRPVRPL FADGWRNETQ VIVTVLSHDM ENDPDVLAMV AASAALTLSG APFRGPIGAA
RVGFMNDEYV LNPTLDEMVD TQLELVVAGT ADAVLMVESE AKELSEDIML GAVMFGHRHF
QPVINAIIEL AEKAAKEPRE VSQADDSALE KEMLGLIEGE LRPAYAIADK QQRQNAVAAA
KAKVIAHYFP EGQEPKYDKL RIAAVFKHLE AKIVRWNILD TGKRIDGRDA KTVRNILAEV
GVLPRAHGSA LFTRGETQAM VVTTLGTGED EQYIDALSGT YKETFLLHYN FPPYSVGETG
RLGSTKRREI GHGKLAWRAI HPVLPPHHEF PYTIRVVSEI TESNGSSSMA SVCGASLSLM
DAGVPLKRPT AGIAMGLILE GSRYAVLSDI LGDEDHLGDM DFKVAGTEVG ISSLQMDIKI
AGITEEIMKV ALAQAREGRI HILGEMAKAL TNARAELGEY APRIETFKIP TDKIREVIGT
GGKVIREIVE KTGAKINIED DGTVKVASND GEAMKAAIKW IKSIASDPEV GQIYEGTVVK
VMEFGAFVNF FGAKDGLVHI SQLAANRVQK SSDIVKEGDK VKVKLLGFDD RGKTRLSMKA
VDQQTGEDLE AAGHKAEKAD APREAAGE
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