Gene Nham_0026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0026 
Symbol 
ID4029793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp27538 
End bp27957 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content65% 
IMG OID637968560 
ProductXRE family transcriptional regulator 
Protein accessionYP_575388 
Protein GI92115659 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGACCA AGGCGCCCAA TCCTGTTGAC AAGCATGTCG GCAGCCGTGT GCGCATGCGC 
CGCATCATGC TGGGCATGAG CCAGGAAAAG CTCGGCGAGG CTCTGGGGCT GACATTCCAG
CAGGTTCAGA AGTACGAGAA GGGCACTAAT CGCGTCGGCG CGAGCCGCAT CCAGCAGATT
TCCGACATCC TGCAGGTTCC GGTCTCGTTT CTGTTCGAGG GCAGCCCAGG CACAGGCATC
GCCGTGGCCG GCGGTCTGAG CGAGGCGCCA TCCCCTGCCT ACGTCTCCGA CTTTCTCGCG
ACCTCCGAAG GTCTCGCGCT AACCCGCGCA TTCACGCGGA TCACCGACGC GAAACTCCGC
CGCAGCATCG TCGACCTGGT CGAGCAGATC GCGGCCCGCG AACCGCCCGA CCGGCGCTAG
 
Protein sequence
MSTKAPNPVD KHVGSRVRMR RIMLGMSQEK LGEALGLTFQ QVQKYEKGTN RVGASRIQQI 
SDILQVPVSF LFEGSPGTGI AVAGGLSEAP SPAYVSDFLA TSEGLALTRA FTRITDAKLR
RSIVDLVEQI AAREPPDRR