| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0012 |
|---|
| Symbol | |
|---|
| ID | 4029838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 14196 |
|---|
| End bp | 15239 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637968546 |
|---|
| Product | tryptophanyl-tRNA synthetase |
|---|
| Protein accession | YP_575374 |
|---|
| Protein GI | 92115645 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0108214 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACAC GGGTTTTTTC GGGCGTTCAG CCGACCGGCA ATCTGCATCT CGGCAACTAT
CTCGGCGCCA TCGTCAATTT CGTGAAATTG CAGGCCGACC ACCAGTGCCT CTATTGCGTG
GTCGATCTCC ACGCCATCAC CGTTCCCGTC GCCGTCTGGG GCGGCCCGGA TGAATTGCGC
CGCAACACCC GCGAGGTGAC CGCAGCCTTC ATCGCCAGCG GTATCGATCC GAAGCAGCAC
ATCATCTTCA ACCAGAGTCA GGTGGCGGGC CATGCCGAAC TGACCTGGGT GTTCAACTGC
GTGGCGCGGC TCGGCTGGCT CAACCGCATG ACCCAGTTCA AGGAAAAGGC CGGCAAGGAT
CGCGAGAACG CGTCGATCGG CCTGTACGAT TATCCGGTGC TGATGGCCTC GGACATCCTG
CTCTATCGCG CCACGCACGT TCCGGTCGGC GAGGACCAGA AACAGCACCT CGAACTCAGC
CGCGACATCG CGCAGAAATT CAACAACGAC TTTTCCGCTT CAATTGCCGG CAACGGCCAT
GGCGACGGTT TCTTTCCGCT GCCGGAGCCC GTGATTACCG GACCCGCGAC GCGCGTGATG
AGCCTGCGCG ACGGCACCAA GAAGATGTCG AAGTCGGATC CGTCGGATTA TTCGCGCATC
AACCTCACCG ACGATGCCGA CACCATCGCG CAAAAGATCC GCAAAGCCAA GACCGACCCG
GAGCCGCTGC CGTCGGAGGA AAAGGGGCTG GAAAGCCGCC CCGAAGCCGA CAATCTCGTC
GGCATCTATG CGGCATTGTC AGGGAAACCC AAACCCGAGG TGCTCGCGCA ATTCGGCGGC
GCGCAGTTCT CGGGCTTCAA GTCCAACCTC GTCGATCTCG CGGTCGCAAA GCTGTCGCCG
ATCGCAGCAG AAATGAAACG GCTGACCGAC GATCCGGCCT ATGTCGAGGG GATTCTGATC
GAGGGCGCCG ACCGCGCCCG CGCCATCGCC TCCGAAACCA TGAATGCGGT GAAGGACATC
GTCGGTTTCA TCCGCAAACG ATAA
|
|---|
| Protein sequence | MTTRVFSGVQ PTGNLHLGNY LGAIVNFVKL QADHQCLYCV VDLHAITVPV AVWGGPDELR
RNTREVTAAF IASGIDPKQH IIFNQSQVAG HAELTWVFNC VARLGWLNRM TQFKEKAGKD
RENASIGLYD YPVLMASDIL LYRATHVPVG EDQKQHLELS RDIAQKFNND FSASIAGNGH
GDGFFPLPEP VITGPATRVM SLRDGTKKMS KSDPSDYSRI NLTDDADTIA QKIRKAKTDP
EPLPSEEKGL ESRPEADNLV GIYAALSGKP KPEVLAQFGG AQFSGFKSNL VDLAVAKLSP
IAAEMKRLTD DPAYVEGILI EGADRARAIA SETMNAVKDI VGFIRKR
|
|---|
| |