| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0010 |
|---|
| Symbol | |
|---|
| ID | 4029836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 11419 |
|---|
| End bp | 12420 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637968544 |
|---|
| Product | PfkB |
|---|
| Protein accession | YP_575372 |
|---|
| Protein GI | 92115643 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00317456 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCAG CGAAATACGA CGTGCTCGGG ATCGGCAATG CGATTTTCGA CGTTCTGGTG
CGGACCGACG AGGGCTTTCT TGCTGCCCAC GGCATGGTCA AGGGCGGCAT GGCGCTGATC
GACGAGGCGC GCGCCGCATC GATCTATGCT GATATGGGGC CTGCGACCGA AATGTCGGGC
GGCTCGGCCG CCAACACCAT TGTCGGTCTC GCTGGATTCG GCGCGCGCGC CGCCTATGTC
GGCAAGGTGA AGGACGATCA GATCGGCCGT CTCTATACCC ATGACATTCG CGCCGCGAAG
GTGGCGTTCG ATACGCCGCC TGCATCCGGC GGTCCGGCCA CCGGCTGCTC CTACATTCTG
GTGACGCCGG ACGGCGAGCG CACCATGAAC ACCTATCTCG GCGCCGCGCA GGATCTGTCG
CCGGCGGATA TCGATGCGGA GACCGTCGCC GCCGCATCGA TCCTCTATCT CGAGGGCTAT
CTGTGGGATC CCAAGGCCGC CAAGGACGCG TTCCTCAAGG CGTCGCAGAT CGCGCATGGG
GCGAATCGCC AAGTGGCGCT GACGCTGTCG GATGCGTTTT GCGTCGATCG CTACCGTGAC
GAGTTTTTGC AGTTGATGCG AAGCGACGCC GTCGATCTGG TCTTCGCCAA CGAGACTGAG
CTGCGTTCGC TTTATCAGAC CTCGGACTTC GACACCGCGC TGGCGCAATT GCGCAAGGAT
GTCGCGCTCG GCGTCGTCAC CCGCAGCGAG AAGGGCTGTG TGGTTGCAAC GAAAGACGAC
GTCGTCGCGG TGCCGGCGTG TCCGATCGAC GGGCTGGTCG ATACCACCGG CGCCGGTGAT
CTGTTCGCCG CCGGGTTTCT GTTCGGCCTG GTGCGCGGCA CGAGCCATGA AAACGCGGGC
CGGCTCGGTG CGCTCGCCGC TGCCGAAGTG ATCCAGCACA TCGGCGCGCG GCCGCAGGTG
TCGCTGAAAG AGTTGGCGCA GGCCAACGGG CTGCCGGCGT GA
|
|---|
| Protein sequence | MTSAKYDVLG IGNAIFDVLV RTDEGFLAAH GMVKGGMALI DEARAASIYA DMGPATEMSG
GSAANTIVGL AGFGARAAYV GKVKDDQIGR LYTHDIRAAK VAFDTPPASG GPATGCSYIL
VTPDGERTMN TYLGAAQDLS PADIDAETVA AASILYLEGY LWDPKAAKDA FLKASQIAHG
ANRQVALTLS DAFCVDRYRD EFLQLMRSDA VDLVFANETE LRSLYQTSDF DTALAQLRKD
VALGVVTRSE KGCVVATKDD VVAVPACPID GLVDTTGAGD LFAAGFLFGL VRGTSHENAG
RLGALAAAEV IQHIGARPQV SLKELAQANG LPA
|
|---|
| |