Gene Ndas_3558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3558 
Symbol 
ID9247427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4267453 
End bp4268220 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content75% 
IMG OID 
ProductLamB/YcsF family protein 
Protein accessionYP_003681465 
Protein GI297562491 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.455471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.87063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCATCG ACCTCAACTC CGACCTCGGC GAGAGCTTCG GCCGCTGGGA ACTCGGCGAC 
GACAAGGCAC TGCTGTCCAT CGTGACCAGC GCCAACGTCG CCTGCGGCTT CCACGCCGGT
GACCCGTCCG TGCTGCGGCG CACCACGCTC GACGCCGCCG CCGGGGGAGT GGCCGTCGGC
GCGCACGTGG GCTACCGCGA CCTCGCCGGG TTCGGCCGCC GCTTCCTCGA CGTGCCGCCC
GCCGAGCTGA CCGACGAGGT GGTCTACCAG ATGGGGGCGC TGTCGGCGTT CACCCGCCTG
GCCGGGGACC GGATCCGCTA CGTCAAACCG CACGGTGCCC TCTACAACAC GATCGTGCAC
CACGAGAAGC AGGCCGCCGC GGTGGTCGCC GCGGTGCGCG AGTTCGACCC CGCCATGCCC
GTGCTGGGCC TGCCCGGATC GCAGTTCCTG CGCCTGGCCG AGGAGGCCGG ACTGCCCACG
CACCGCGAGG CCTTCGCCGA CCGCGCCTAC ACCCCGGAGG GCACGCTGGT CTCGCGCCGC
GAGCCCGGCG CCGTCCTGCA CGACCCGGCC GCCATCGCCG AGCGCTGCCT GCGCATCGCC
CACGGCGAGC CGGTCGAGGC CGTGGACGGC ACCCGGATCG TCATCGAGGC CGACTCCCTG
TGCGTGCACG GCGACAGCCC CGGCGCGGTG GACATCGCCC GGGCCGTGGC CGACCGGCTG
CGCGCCGAGG GCGTCACCCT CGCGCCGTTC ACCGGGGAGG CCGCGTGA
 
Protein sequence
MRIDLNSDLG ESFGRWELGD DKALLSIVTS ANVACGFHAG DPSVLRRTTL DAAAGGVAVG 
AHVGYRDLAG FGRRFLDVPP AELTDEVVYQ MGALSAFTRL AGDRIRYVKP HGALYNTIVH
HEKQAAAVVA AVREFDPAMP VLGLPGSQFL RLAEEAGLPT HREAFADRAY TPEGTLVSRR
EPGAVLHDPA AIAERCLRIA HGEPVEAVDG TRIVIEADSL CVHGDSPGAV DIARAVADRL
RAEGVTLAPF TGEAA