Gene Ndas_2218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2218 
Symbol 
ID9246068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp2649757 
End bp2650878 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content67% 
IMG OID 
ProductEndo-1,4-beta-xylanase 
Protein accessionYP_003680146 
Protein GI297561172 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.000000248753 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones1 
Fosmid unclonability p-value0.00000085459 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCCAGCA CGGCCTCCTC CCCCTGGCGC CCGCTCACCC GCGGACGCGG AGCCCTGCTG 
ACCGCCACCG CCCTGTGCGC GATCATCCTC CTGGTCACCG CGATCCTGGC CCTCACCCTG 
CCCGCCCAAC CAGAATCCAC CGGCGCCGCA CAACTCCCCC ACCTGGCCCG CCAGAGCGAC 
ATCGACCTGG GCGTCGCCGT AGCCGTCAAC CCCCTCGTCC ACGACCGCGA GTACCGCTCG 
GTGGTCACCG AGCACTACAC CTCCCTGACC GCCGAGAACA CCATGAAATG GGAGTACGTC 
CAACCCCGAC GCCACACCTT CGACTGGAGC GGCCCCGACA CCGTCGTCGA CTTCGCCGAA 
CGCAACAACC TCACCGTGCA CGGCCACACC CTGCTCTGGC ACAACCAACA ACCCGCCTGG 
CTCGCACAAG GCACCTGGAC CCCCGACGAA CTACGCCAGG TCATCCGCGA ACACATGCAG 
GCCCTCATGG GCCGCTACCA AGGACGCGTC ACCTCCTGGG ACATCATCAA CGAACCCTTC 
GAGGACAGCG GCCCCCGCCT ACGCGACAAC CTCTGGTACC AGGTCCTGGG CGAGGACTAC 
ATCGCCGAGG CCCTCACCAC GGCCCACGAG ATCGACCCCC AGGCCCGCCT CTACATCAAC 
GAGTTCGGCA TCGAAGGCGG CGGCCCCAAG ACCGACGCCC TCTACCAACT GGTCACCACC 
CTGCTCGAAC GCGACGTCCC CCTGCACGGC ATCGGCTTCC AGAGCCACTT CATCCACGGA 
CACGTCCCCG ACGACCTCGC CGAACAACTA CGCCGCTTCA CCGACCTGGG CCTGGAGGTC 
AGCATCAGCG AACTCGACGT ACGCATCCCC GAACCCGTCC CCAACGGAGC CCTCCAGGAC 
CAGGCCCGCG AATACGCACA GGTCGTCCAG GCCTGCCTGG ACGTACCCCG CTGCGTACGC 
GTGTCCGTGT GGGGAGTCAG CGACCAGCAC TCCTGGATCC CCGAATGGTT CCCCGGCTAC 
ACCGCCGCAC TGCCCTTCGA CGACTCCTAC GCACCCAAAC CAGCACTCAA CGCCATGGTC 
CAGACCCTCT CCCGCCGACA CCCCCGTCCC CCGACGCACT GA
 
Protein sequence
MPSTASSPWR PLTRGRGALL TATALCAIIL LVTAILALTL PAQPESTGAA QLPHLARQSD 
IDLGVAVAVN PLVHDREYRS VVTEHYTSLT AENTMKWEYV QPRRHTFDWS GPDTVVDFAE 
RNNLTVHGHT LLWHNQQPAW LAQGTWTPDE LRQVIREHMQ ALMGRYQGRV TSWDIINEPF 
EDSGPRLRDN LWYQVLGEDY IAEALTTAHE IDPQARLYIN EFGIEGGGPK TDALYQLVTT 
LLERDVPLHG IGFQSHFIHG HVPDDLAEQL RRFTDLGLEV SISELDVRIP EPVPNGALQD 
QAREYAQVVQ ACLDVPRCVR VSVWGVSDQH SWIPEWFPGY TAALPFDDSY APKPALNAMV 
QTLSRRHPRP PTH