Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_2190 |
Symbol | |
ID | 9246040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 2617929 |
End bp | 2618585 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003680118 |
Protein GI | 297561144 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000643495 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000215707 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGATCGCCA TCAACCTCGT CGACGACGAA GCCCTCATCC GCGCCGGACT GGCCGCCCTC ATCAACGCCG AGGACGACAT GCGGGTCACC GGCCAGGCCG ACGACGGCGC CGACGTACCC GACCTGGTCC GACGCACCCG ACCCGACCTG GTCCTGATGG ACGTGCGCAT GCCCCGCCTG GACGGCATCC AGGCCACCCG CACCCTGCAC ACCACCCTGA CCCACCCGCC CCGCGTCATC GTCCTCACCA CCTTCGACAA CGACGACTAC GTCTGGGGCG CCCTACGCGC GGGCGCCCAC GGATTCCTCC TCAAACGCAC CCCGCCCGAG GACATCCTGG CCGCCATCCG CCTCGCCCAC CGCGGCGACA CCCTGCTCTT TCCCACCGCC CTGCGCCACC TGGCCGCCAC CCAACCCGCC GCCCCCACAC CCGCCGCCCG CGCCGTGGCC ACCCTCACCC AGCGCGAGTC CCAGACCCTC ACCCTCATGG CCCAGGGGCT CACCAACGCC GAGATCGCCG ACCGCCTCTT CCTGGGCACC GAGACCGTCA AGACCCACGT CTCCCACATC CTCACCAAGC TCGGCGTCCG CGACCGCACC CAGGCCGTGA TAGCCGCCTA CGACTCCGGC CTCATCCGCC CCAACACCGG CCGCTGA
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Protein sequence | MIAINLVDDE ALIRAGLAAL INAEDDMRVT GQADDGADVP DLVRRTRPDL VLMDVRMPRL DGIQATRTLH TTLTHPPRVI VLTTFDNDDY VWGALRAGAH GFLLKRTPPE DILAAIRLAH RGDTLLFPTA LRHLAATQPA APTPAARAVA TLTQRESQTL TLMAQGLTNA EIADRLFLGT ETVKTHVSHI LTKLGVRDRT QAVIAAYDSG LIRPNTGR
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