Gene Ndas_1961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1961 
Symbol 
ID9245811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2386026 
End bp2387360 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content69% 
IMG OID 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_003679894 
Protein GI297560920 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000367534 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000631341 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCACCG CACCCCACCA CCGCGCAGGC CGCCTCACCA CCCTGGCCTA CCTCTTCCTC 
CTGCTCTCCC AGAACATCGC CGCCCTCCTC CTGCTCCCCC TCGTCCTGCT CTCGGCCGTA
CTCACCCTCA CCTGGGTCGG CCTCCCCTTC GTCATCCTCA CCGCCCTCCT CCTGCGCACC
CTCGCTGACA GCCAACGCCG CACCCTCAGC CACCTACTCA TCAAAAACAG CAAACCCCCC
CGAAGCCGCA CCGCCACCCC AGGCCTACCC ACCCCCACCA CCCGCCCCCT ACACCGCCCC
ATCGTCTCCG CCTACCGCCC CATCCCCCCC ACCGGCATCA CCCGCCGCGG CACCGCCATC
ATCACCGACC CCGCCACCTG GAGAGACCTG CTCTGGCTCA TCTCCGGAGC CGCCAGCTTC
CTCCTCGTCG CCACCCCCCT CACCCTCATC GCCCACGGCA TCGAACAACT CCTCTTCGCC
CTCAACCTCA CCGGCCCCAC CCTCTACGAC ACCTACACCC CCACCACCAC CCTCAACCAA
CTCATCATCC TCATCCCCGC CCTGGCCCTC ATCACCCTGG GCTGGCTCCT CATCCCCCTG
GCCGCCGACA CCTACCTACG CTTCAACCGC CTCCTGCTCT CCCCCTCCGA AAAAGCCCGA
CTCACCGCCC GCGTCGCCCA CCTGGCCACC AGCCGCGCCC ACACCATCGA CACCCAGGCA
TCCGAGATCC GCCGCATCGA ACGCGACCTC CACGACGGCG CCCAAGCCCG CCTCGTCGCC
CTGGGCATGA ACCTGGGCAT GGCCGAACAA ATCGTCGACA AAGACCCCGA AACCGCCCGC
GCCATGCTCA CCGAAGCCCG CGAAACCACC CGCCACGCCC TCACCGAACT CCGCGACCTC
GTCCGCGGCA TCCACCCACC CGTCCTCGTC GAACGCGGCC TCGACGGCGC CGTCCACGCC
CTCGCCCTCA CCCACCACCT GCCCATCACC GTCACCATCG ACCTCCGCGG CCGCCCCGCC
GACCCCGTGG AGTCCGCCGC CTACTTCGCC ATCGCCGAAC TCCTCACCAA CACCGCCAAA
CACGCCCACG CCACCCACGC CTGGATCCAC ATCAACCACG GCCGCAACCG CCTGGTCATC
ACCGTCACCG ACAACGGCAC CGGCGGCGCG GACCCCGCCC CCGGCAGCGG CCTGGCCGGC
ATCCGCAGAC GCCTGGACGC CTTTGATGGC ACGATGAACA TCACCAGCCC ACCGGGCGGC
CCCACCATCG TGACCCTGGA GATCCCGTGC GTGTTGTCAT CGCCGAAGAC CTTGCCCTCC
TCAGAGACGG CCTGA
 
Protein sequence
MATAPHHRAG RLTTLAYLFL LLSQNIAALL LLPLVLLSAV LTLTWVGLPF VILTALLLRT 
LADSQRRTLS HLLIKNSKPP RSRTATPGLP TPTTRPLHRP IVSAYRPIPP TGITRRGTAI
ITDPATWRDL LWLISGAASF LLVATPLTLI AHGIEQLLFA LNLTGPTLYD TYTPTTTLNQ
LIILIPALAL ITLGWLLIPL AADTYLRFNR LLLSPSEKAR LTARVAHLAT SRAHTIDTQA
SEIRRIERDL HDGAQARLVA LGMNLGMAEQ IVDKDPETAR AMLTEARETT RHALTELRDL
VRGIHPPVLV ERGLDGAVHA LALTHHLPIT VTIDLRGRPA DPVESAAYFA IAELLTNTAK
HAHATHAWIH INHGRNRLVI TVTDNGTGGA DPAPGSGLAG IRRRLDAFDG TMNITSPPGG
PTIVTLEIPC VLSSPKTLPS SETA