Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1823 |
Symbol | |
ID | 9245673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 2229534 |
End bp | 2230259 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003679757 |
Protein GI | 297560783 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.506413 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCACG CGCCCTCCGG CACCGCCGCT CCGTCGGCCC GGGCCCTCAT CGTCGAGGAC GAGCCCAACA TCCTCGAACT GCTCACCGCC TCCCTGGAGC TGAGCGGCTT CGCCACGCGC GGCGCGCCCG ACGCGGAGGC CGCCCTGGCC GCGCTGGACG GGTTCACCCC CGACATCGCC GTCCTGGACG TGACCCTGTC CGGCCGCAGC GGCCTGGACC TGGCCGGTGA CCTGCGCGGG GTCGTGCCAG GCCTGCCGGT GCTGTTCCTG ACCGCGCGCG ACACGGTCCA GGACCGGGTG GCGGGCCTGC GGGCCGGCGC CGACGACTAC GTCACCAAGC CCTTCAGCCT GGAGGAGGTC GTGCTGCGGC TGAACGCGAT CCTGCGCAGA TCGGGCCGCC GCGGTTCCGA GGGCGCCGAG CCCCTGCGCT ACGCCGACCT GGAACTGGAC GAGGAGGGGC ACCAGGTGCG CCGCGCGGGC GCGCCTGTGC GGCTCTCGCC CACCGAGTTC GCGCTCCTGC GCTACCTCCT GCTCAACGCG GGCAAGGTCG TCAGCAAGGC GCAGATCCTG GACCGGGTGT GGGGCGGGGA GAGCGACGAC ATCCGCGTCG TGGAGACCTA CGTCAGCTAC CTGCGCCGCA AGGTCGACGC GGGCCGCCCC GCCCTGATCC ACACCGTGCG GGGCGTGGGC TACAGCCTGC GCCTGGCGGC CGGGGGGAAC GGGTGA
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Protein sequence | MPHAPSGTAA PSARALIVED EPNILELLTA SLELSGFATR GAPDAEAALA ALDGFTPDIA VLDVTLSGRS GLDLAGDLRG VVPGLPVLFL TARDTVQDRV AGLRAGADDY VTKPFSLEEV VLRLNAILRR SGRRGSEGAE PLRYADLELD EEGHQVRRAG APVRLSPTEF ALLRYLLLNA GKVVSKAQIL DRVWGGESDD IRVVETYVSY LRRKVDAGRP ALIHTVRGVG YSLRLAAGGN G
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