| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_0404 |
|---|
| Symbol | |
|---|
| ID | 9244242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 495162 |
|---|
| End bp | 496490 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | peptidase M16 domain protein |
|---|
| Protein accession | YP_003678358 |
|---|
| Protein GI | 297559384 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCACCA TCGGAGCGGC GGGACGTGTC GTTCAGTACA CGCTCGACAA CGGATTGCGT
CTGGTGACCG CTGCGGCCTC CACGGGCCAG GTCGCCTCCG TGAACCTGTG GTACGGCGTG
GGGTCCCGGC ACGAGGTCCC CGGGCGCACG GGGTTCGCGC ACCTCTTCGA GCACCTGATG
TTCCAGGGCA GCGGCGGCGT CGCCAAGGGC GAGCACTTCG AGGAGGTCGA GAGGCTCGGC
GGCGACATCA ACGCCTCCAC CTCGACCGAC CGCACCAACT ACTACGAGAC GGTCCCCGAG
CACGCCCTGG ACCGGATCCT GTGGCTGGAG GCCGACCGGC TGGCGACCCT GCGCGAGGGC
ATGACCCAGG AGGTCCTGGA CAACCAGCGC GACGTCGTCA AGAACGAGCG CCGCCAGCGC
TACGACAACC AGCCCTACGG CACCGCCCTG GAGCGCATCC TGCGGCTGGC CTACCCCGAG
GGCCACCCCT ACCACCACCC GACCATCGGC TCCATGGCCG ACCTGGACGC CGCCGACCTC
GACTACGTCA AGTCGTTCCA CAGGGCCCAC TACGGTCCGG ACAACTGCGT GCTCACCGTG
GTCAGCGACC TCGACCCCGA GGACGTCCGG GGCCGCGTGG AGAAGTTCTT CGGTCCCATC
CCGGCCCGCG AGAGCGTCCC CGAGGCGCCC GACGCCGCCC TGGAGGCCCC GCTGGGCGGC
CCGGTCCGCG ACGCGGTCAC CGAGACCGTG CCCGCCGCCG GGGTGTTCCT CGGGTTCCGC
GTCGCCCCCT ACGGCGAGCG CGGGTTCGAC GTCATGCACC TGGCCTCGGC CGTCCTGGGC
CAGGGACAGG GCAGCCGCCT GTACCGCTCC CTGGTGGTGG ACCGCCCCAT CGCCGCCGAC
GACGGCGGCG GCGCCGCCGA CATCCTGCCG TTCCGCTACA CCGACAGCCT GATGCTGGTG
AACATGCTCG CCCGCGAGGG CGTCAGCGGC GACGTTCTGG AGGAGGCCAT GCGCGAGGAG
ATCGCCAAGC TGGCCGCCGG GATCACCGAG GAGGAGCTGG ACCGGGCCCG CGCCGTCCTG
GAGCGCGACC ACCTCCAGTC CATCTCCAGC CCCTCCGGGC TCGCCGACAG CATCAGCAGC
TGCACCCAGC TGTTCGACGA CCCCGAGCTG GCCTACACCT GGCCCCGGCG CTGGGACGAC
ATCACCGCCG AGGAGGTGCG GGCCGCCGCC GAGCGCGTGC TGGTCGACGA CAACCTGCTC
GTCGTCCGCT TCGACCCCGA GGAGTCCGGG GCCGCCGAGG CGGCCGGGGC CGACACCGTC
GACGCCTGA
|
|---|
| Protein sequence | MTTIGAAGRV VQYTLDNGLR LVTAAASTGQ VASVNLWYGV GSRHEVPGRT GFAHLFEHLM
FQGSGGVAKG EHFEEVERLG GDINASTSTD RTNYYETVPE HALDRILWLE ADRLATLREG
MTQEVLDNQR DVVKNERRQR YDNQPYGTAL ERILRLAYPE GHPYHHPTIG SMADLDAADL
DYVKSFHRAH YGPDNCVLTV VSDLDPEDVR GRVEKFFGPI PARESVPEAP DAALEAPLGG
PVRDAVTETV PAAGVFLGFR VAPYGERGFD VMHLASAVLG QGQGSRLYRS LVVDRPIAAD
DGGGAADILP FRYTDSLMLV NMLAREGVSG DVLEEAMREE IAKLAAGITE EELDRARAVL
ERDHLQSISS PSGLADSISS CTQLFDDPEL AYTWPRRWDD ITAEEVRAAA ERVLVDDNLL
VVRFDPEESG AAEAAGADTV DA
|
|---|
| |