| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_1554 |
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| Symbol | |
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| ID | 4461733 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | + |
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| Start bp | 1687294 |
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| End bp | 1690259 |
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| Gene Length | 2966 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | 640068829 |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR03174] CRISPR-associated protein Csc3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00378338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTATCGG ATGCTCTTCA GGATTTGCTC AGAGACCCTG AGAAGCGGTC GTTGTTGAAA
AGACGAGGGG AGGTCTCTGA GGATATCAAT TCCAGGGTTC TGGAGAACTA CTTCAGGATT
GTGGACATAA ATCTTGTCAG AACTGGTATG TGCTTCAGGC CTGCAAAAAG TGTCGAGTTC
GGAAAGACGG ATCAGAGCAT GCTCAACCAC ATCCGGAATG GGGTTTTCTT CCTGCTTCGC
TTCAATGATG CCCTCAAGAG GCTCGGTGTG AGAGCACTCG ATGAGGCCGG GCTCAGGGAG
TGTATAGCCC TTTTTGTGGT ACATGACCTT CACAAACTGG ACTATGGAGA GATGGATGGG
GACAGTCAAA AGAACAGCAT GGAGAATGAG TTCGATATAC CGGAAGATGT AGTCAAAAAG
TATGTCGAGG AGATGCACCT CAGCGAGTTC GCTCGTGAGT TGAGGGACGA CGATTACTAC
TCTGTGGTTG TGGCACTTCA CAAAAGCAGG TTCTCAAGAC CAGGAGCGAG AACCTCACGG
TTCATGGACC TCGAGCCGTT TCTGTACCTC ATGGACACAA TGGCCAGCTG CTCCTCCCCC
GAGGAGGCGG CATCTCCCAG AGCCCTCAGG GCCCTGCGTG ACGGCTTTCC TCAGGATGCG
GCTGAGAAAC AGCTGAACCT TCAGTATCAC AGGCTTGACG ACGTCAAGGG GATTCTCACA
GGTCTTCTGA ACAAATCTAT CGCTGAGGTG CTTGAGGAAA GCGGGCTCGT GATGCTGATG
ACGTATCAGG ATGGGTGCGT CTATCTCGGA AAGGGGAATC GGAGAGCGTC CATCTCTGAT
GAGCTTGTTG AACGCATATA CCACCGGCTT GAGAAGAACA TACAGGATTC GACTCCGGCG
CTCTCTGAGG TTGGATCTAT CGTCAAGAAT GTGGATGTGC AGGGGAACTT GAACTGCTAC
CGATTGGATG ATAAATATTA TTTCTTCAGC GGACCGGATA GGGTTTTACG TGCGTATATT
GAGAAGGCAA CCGTATCTGC GCGCAGTGTA AAAACCAAGC TATCCAAGCA GATGCTCGAA
AACATTGGGA GGGCGCTGAG GGCAGCAGAC ATCGACGTGG AGCTCTCAGA TCAGGATGGC
AGGATCGTTG TGGAGTATGC TAGAGCGATC CACGCAGTCC ATAAAATCGT CTCGGAGATC
ATCAAGGATA ACACAGAGGC GCTCGCATGG AGCTGCGACG CCTGGGGCGT TACTGAGGAT
GTGAAGAGAA GGCTTCTCAG CATCCCATCC GGCGAACTGA CGAGCGGAGG TAAGTGGGAG
TATGCTTACG CCATAGCCAG GTGCGTTATG GATGCTGAAA GCGACGGCGT GAAGATCAAA
AACATGGAGC CAGCGCGCGC CGCCGATATT CTCTTCGAGA GGATATGGGG TGCCTTAAAA
TCCACTGAGG GGTGGGACGC CTTCATCTCA GAAAAGACAA GCACATACAG AGAGGAGATC
GCGGCATACA TCCATGAGAC GCTGTCTGTA AACGGAACGA TATCAGTATC GAGCGGATCC
GACCTGAGTG ATCCATACAG GGAGTACCAA AGAGGCGGAA GCGGAAGGAT ATGCAACCTC
TGCAACAGCG GAACCCTGCT GAGACAGGAT GAGATGAAAT TGCCGATTAC AGTCTCCATG
CTGAAATTCA ACTTCAGCAA CAGGATTTTT GCAGGAAAGA CCAAGCCCGA TAACATATAT
GCATGCGTCC CATGCGGTGT TGAGCTGGTG CTCAGGCAGA ACGGTTGCGA GATCTCCAGG
AGAGCTAATG AGGATATGCT CTACTTACAC ATGATTCCGG ATTACTTCTT CACTCCTGAA
TCGTGGGAGA TCGCTCACAG CATTCTGAGC ATGTTCTCCG GGGAGAATGG AGTGCGGATG
GCGGCTCTTG CAGATAAGAT CTTCAAATCG AAGTACGTTG GGGGATCATC GGATCTGAAA
ACCGATTTTT ATGAGTCGTG GATCGAGGAG CTTGCTTCCC GGGAGAAGAG CAGGAATATG
ATGCAGTACA TGGCGCAGAG TTTTGACATG ATCGGAAATC CTTGCATGGT CTTCTACAAA
CCCTCTGGGA ACACAACAGA GTTTCATTTC TTCGGCACAT ATCTCGCCCT GATCCTGGCA
GCCTACACCG GCATGCGGGT TGTTGTAAGC CACTCGCCCA TAACAACTGT GCGCGGAAGG
GATTTTAGGG AGTTCGTGGC CCTTGACTCC GTTGACTCCC ATGTGACGGG TTTTTACAAA
AAGATGATAC CACTGTCGCA GATGGAGTTT CGCATCAAGG CCGCAAGCGC TCTCATACGC
CTCGGCTATG GCTCGAAGCT GGAGGACTCG CTTTTTCCGA AATATCTTAG GGTATTCAGG
GATGAGCCGC TTCCTGGCTC GTATCTTCTC AAGATGGTGT ATCGGGATGC GGATGAGGGC
GAGGCGAAGG TCAGAAATCT GATCGATGAG GCGATCTTTC TTGATAAAGT AAAAGGGATG
TGATTAATAT GGATGTGTCC GACAGGATCT GTCATCTTGC AGAGCTCGGA TTCGATATCG
CACAGCCGAA GGGTTACAAG CCGTACGCGG TCGAACGTCT GTTTCGGGAG GCTGTGAAGG
CTGTAACAGA ACTCCAAGGG ATGCCACTCT CCAAGCATGA CTACATGGCA GCTGTTTCCG
GAAAGATACA GAAGGCAATC GAGCGCATGG GGGACGATCA GGCGTTCGTG CCTGAGAGGA
AGGGCCTCGA CGAAAAGGCG GACAGGTTTG CCCAGCACTT CGTGGAGGAG ATACTTAATG
GCATCTGCGA TGGAAGGCCT GGAAGGCTGA AGAAACTGGC GAACAACTTA GCTGACGGAT
ACTATTCTGC AACATTGAAT ATACGAAGGA GATACTGGAA AAATAAGAAT GCTGAGGATT
TAAAGAATAT GGAGGAATCT GTATGA
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| Protein sequence | |
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