| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0639 |
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| Symbol | |
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| ID | 4462279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosaeta thermophila PT |
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| Kingdom | Archaea |
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| Replicon accession | NC_008553 |
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| Strand | + |
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| Start bp | 665958 |
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| End bp | 666923 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639699647 |
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| Product | CRISPR-associated Csh2 family protein |
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| Protein accession | YP_843069 |
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| Protein GI | 116753951 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3649] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR01595] CRISPR-associated protein, CT1132 family
[TIGR02590] CRISPR-associated protein, Csh2 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00285412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAG TCTCGAACAG ATCTGAGCTG CTGTTCATCT ACGATATAAG AGATGGGAAT
CCGAATGGAG ATCCGATGGA CGAGAACAAA CCGCGCATGG ATGAGGAGAC AGGGGTGAAC
CTGGTAACCG ATGTGCGTCT CAAGAGGACG ATAAGAGATT ACCTCCACAA TTTCAAAGGG
CTCGAGATAT TCGTGAGGGA GATAATCTAT GATGAGGAGA ACGGGTACAT CCAGGACGCC
AAGAGGAGGG CCAAGGATTT CGGGGAAGAT CAGGAGAGGA TTCTGAGTGA GTGCATCGAC
GTGAGGCTGT TCGGCGGTGT GATTCCGCTA GAGAAACGGA GACAGAACAA GCAAAAAGAT
GAGGGTGAGG GATCATCCAA AGGGGATTCG ATTACCTATA CAGGACCTGT TCAGTTCAAG
ATGGGGCGCT CGCTCCACAG GGTGGCCCTG AAGCACATAA AGGGCACAGG AGCATTCGCC
TCGAAGGAGG GCATGACGCA GGCGACGTTC CGCGAGGAGT ATGTTCTCCC CTACTCACTG
ATACTCTTCT ACGGCATAAT AAACGAGAAT GCTGCGAAGC ACACTGCTCT CACAGAGGAG
GATGTGAGGC TGCTCCTCGA GGGCATGTGG AACGGGACGA AGAGCTTGAT ATCGAGAACG
AAGGCAGGAC AGGTGCCCAG GCTGCTGCTC AAGGTCAACT ACAGCAAGGC GAACTACCAC
ATCGGGGATC TGGACAGGAT GATAAAGCTG GTATCGGATG TGCAGCACGA GGCGATCAGA
GGGCCCGAGG ATTTCTGTCT CGATGTCTCA GCGCTTGTGA GCAGGCTCAA AGCTGAGAAG
GACTCGATCA GGGATCTTGA GCTCTGCTTC GACAGGCAGC TCAGGTTCGT CAGGGACGGC
GCCGAGTTCT CCATGGAGAA GCTGAACGAA GCAACTGGCA TAGCGGTAAA TCCGATTGCG
TTCTAG
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| Protein sequence | MSTVSNRSEL LFIYDIRDGN PNGDPMDENK PRMDEETGVN LVTDVRLKRT IRDYLHNFKG
LEIFVREIIY DEENGYIQDA KRRAKDFGED QERILSECID VRLFGGVIPL EKRRQNKQKD
EGEGSSKGDS ITYTGPVQFK MGRSLHRVAL KHIKGTGAFA SKEGMTQATF REEYVLPYSL
ILFYGIINEN AAKHTALTEE DVRLLLEGMW NGTKSLISRT KAGQVPRLLL KVNYSKANYH
IGDLDRMIKL VSDVQHEAIR GPEDFCLDVS ALVSRLKAEK DSIRDLELCF DRQLRFVRDG
AEFSMEKLNE ATGIAVNPIA F
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