| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0587 |
|---|
| Symbol | |
|---|
| ID | 4462568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 607217 |
|---|
| End bp | 607909 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639699594 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_843018 |
|---|
| Protein GI | 116753900 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000200317 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGGGTGA TATCGCTCAG CGACATAAGA AAGACATACA TCACAGGCGA TGTGGAGCTC
CCCGTGCTGA AGGGAATCAA CCTTAGCATA GACTCGGGAG ATTTCCTGGC GCTGATGGGG
CCGTCGGGCA GCGGGAAATC CACGCTTATG AACATCATCG GATGTCTTGA CAGACCAACT
GCAGGCACCT ACATTCTTCT CGATCGGGAT GTGAGCAGGG CTTCAGAGGA GGAGCTCGCG
ATGATAAGAA GAGACAGAAT AGGCTTCATA TTCCAGGCCT TCAATCTCAT CGGGCGGATA
TCCGTGCTCA AGAATGTCGA GCTGCCGATG ATGCTCAAAG GCATGCCACG TGATGAGCGG
AGAGACAGAG CGCTTGAGCT GCTGAAGTCC GTTGGCGTGG CGCACAGGGC AGATTTCAGC
CCGCTCAACA TCTCCGGAGG AGAAAGGCAG AGGGTCGCGA TAGCACGGGC GCTTGCAAAC
AACCCTGAGA TCATAATCGC GGACGAGCCC ACAGGGAATC TTGATCTCAA AAGCACAGAG
GAGGTAATGG ATATTCTGAG CGGTCTGAAC AGAGAAGGCC GGACGATCAT AATGGTCACA
CACAACCCTG AGATAACAAA GTACTGCAAC CGTGTCATCG GAATGAGGGA CGGCAGAATA
CTAGATCAGT CATCGATGGA GGAATCATCA TGA
|
|---|
| Protein sequence | MRVISLSDIR KTYITGDVEL PVLKGINLSI DSGDFLALMG PSGSGKSTLM NIIGCLDRPT
AGTYILLDRD VSRASEEELA MIRRDRIGFI FQAFNLIGRI SVLKNVELPM MLKGMPRDER
RDRALELLKS VGVAHRADFS PLNISGGERQ RVAIARALAN NPEIIIADEP TGNLDLKSTE
EVMDILSGLN REGRTIIMVT HNPEITKYCN RVIGMRDGRI LDQSSMEESS
|
|---|
| |