| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1780 |
|---|
| Symbol | |
|---|
| ID | 7090897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 1940864 |
|---|
| End bp | 1942807 |
|---|
| Gene Length | 1944 bp |
|---|
| Protein Length | 647 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643465108 |
|---|
| Product | sulfate adenylyltransferase, large subunit |
|---|
| Protein accession | YP_002362088 |
|---|
| Protein GI | 217977941 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0529] Adenylylsulfate kinase and related kinases
[COG2895] GTPases - Sulfate adenylate transferase subunit 1 |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00455] adenylylsulfate kinase (apsK)
[TIGR02034] sulfate adenylyltransferase, large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAAT CGGTCGCCGC CGCGTCGTCG GGCGGACTGT CGGCGCAAGC GGAGCCGTCT
GACGCCGCGC CGCCGCCAAC CTTGCGGCTG ATCACTTGCG GCTCCGTCGA TGACGGCAAG
TCGACGCTGA TCGGACGCCT GCTGTTTGAA CAGAGCCTCA TCTTCGACGA TCAGTTCGCC
GCTCTCGAGC GGGACTCGAA GCGGCACGGC ACGACCGGCG ACGACATCGA CTTCGCCCTT
CTCGTCGACG GCCTCGAGGC CGAACGCGAG CAGGGCATCA CCATCGACGT CGCCTATCGC
TATGTCTCGA CGCCGCGCCG CGCCTTCATC ATCGCCGACA CCCCCGGCCA TGAGCAATAT
ACGCGCAACA TGGCGACCGC CGCCTCAAGC GCCAGCCTCG CCATTCTGCT CGTCGACGCC
CGCAAGGGGC TGCTCACCCA GACCTGCCGT CACGCCGCCA TCGTCTCGCT AATCGGCATC
AAACATGTCG TGCTGGCCGT GAACAAGATC GACCTCACCG GCTTCGACGA GGCGGGGTTC
CACAAGATCG TCGCCGACTT CAAGGCTTTC GCCGCGACGC TCGGCTTCGC CTCGATCACG
CCGATCCCGA TCTCCGCCCG CCATGGCGAC AATGTCTCGG AAAAAAGCTC CAACACGCCT
TGGCACAAGG GGCCGGCGCT GCTCTCCTTC CTCGAGACAG TCGACGTCGA GGAAGACCAG
AGCGCAAAAC CGTTCCGCTT TCCCGTGCAA TGGGTGAACC GGCCCCATCT CGACTTTCGC
GGCTTCGCCG GGACGATCGC CAGCGGTTCG GTGCGGCCGG GCGATGAAAT CGTCGTCGCC
GGTTCCGGCA AGATCTCGAA GGTCGCGCGC ATCGTCGCCG CCGACGGCGA TCTTGCCAGC
GCCGGCGCGG GCGAGGCCGT CACCCTGACG CTTGAAGACG AACTCGACAT CGCGCGCGGC
GATCTTCTCT CCGACGCCAA AAGCCGGCCG GAGGTGTCCG ATCAATTCGC CGCCCATCTC
ATCTGGATGA GCGAAGACAA GCTCATGCCC GGCCGCTCCT ATCTCTTGAA GAGCGGCGCG
AAAACCGTTC CCGTCACGGT GACGGAGCTG AAGCACCGCA TCGACGTCAA CACGCTCGGC
GAGCTCCCGG CGCGCACCCT GAGCCTTAAC GAAGTCGGCG TCTGCAATCT GGCGACAGCG
ACGCCGATCG CCTTCGACCC TTACACAGAC AATCACACCA CCGGTTCGTT CATTCTGATC
GACCGCGCGA CCAACGCCAC CGCGGCCGCC GGCCTGATCT CTTTTGGCCT GCGCCGCGCC
ACCAATATTC ATCGGCATGG GCTCAGCATC GGCAAGCTCG ACCGCGCGCG GCTGAACAAT
CAGAAGCCGG CGGTGTTGTG GTTCACGGGG CTTTCGGGCT CGGGCAAATC CACCATCTCC
AATCTCGTCG AGTCCTGGCT TTATGCGCAT GGCATGCGCA CCATCCTGCT CGACGGCGAC
AATATCCGCC ACGGGCTCAA CAAGAATCTC GGCTTCACTG AGGTCGACCG CGTCGAAAAT
ATCCGCCGCG TCGGGGAGGT CGCCAAGTTG ATGACGGATG CGGGACTTAT CGTCCTTTGC
TCCTTCATCT CGCCGTTCAA CGCCGAACGC CAACTTGTGC GCGATTTGCT GGACGACGGC
GAATTCTTGG AGATTTTCGT CGACACACCG ATCGAGGATT GCATCGCGCG CGACCCGAAG
GGCCTCTACA AAAAGGCGCT CGCCGGCGAG ATCAAGAATT TCACCGGCGT CGATCAGCGC
TATGAGGCGC CGCAAAATCC CGAAATGATC GTCGCCCGTG ACGGCCAGAC GCCGCAACAG
GCCGCGGCCG CCATCGTCAA GGAGCTAATC CGGCGCGGCT TCATCGACAG CTTCGCTGAT
CCGGGAGACG ATTTCTCGAT CTGA
|
|---|
| Protein sequence | MLESVAAASS GGLSAQAEPS DAAPPPTLRL ITCGSVDDGK STLIGRLLFE QSLIFDDQFA
ALERDSKRHG TTGDDIDFAL LVDGLEAERE QGITIDVAYR YVSTPRRAFI IADTPGHEQY
TRNMATAASS ASLAILLVDA RKGLLTQTCR HAAIVSLIGI KHVVLAVNKI DLTGFDEAGF
HKIVADFKAF AATLGFASIT PIPISARHGD NVSEKSSNTP WHKGPALLSF LETVDVEEDQ
SAKPFRFPVQ WVNRPHLDFR GFAGTIASGS VRPGDEIVVA GSGKISKVAR IVAADGDLAS
AGAGEAVTLT LEDELDIARG DLLSDAKSRP EVSDQFAAHL IWMSEDKLMP GRSYLLKSGA
KTVPVTVTEL KHRIDVNTLG ELPARTLSLN EVGVCNLATA TPIAFDPYTD NHTTGSFILI
DRATNATAAA GLISFGLRRA TNIHRHGLSI GKLDRARLNN QKPAVLWFTG LSGSGKSTIS
NLVESWLYAH GMRTILLDGD NIRHGLNKNL GFTEVDRVEN IRRVGEVAKL MTDAGLIVLC
SFISPFNAER QLVRDLLDDG EFLEIFVDTP IEDCIARDPK GLYKKALAGE IKNFTGVDQR
YEAPQNPEMI VARDGQTPQQ AAAAIVKELI RRGFIDSFAD PGDDFSI
|
|---|
| |