| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0001 |
|---|
| Symbol | dnaA |
|---|
| ID | 7094256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 362 |
|---|
| End bp | 1882 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643463336 |
|---|
| Product | chromosomal replication initiation protein |
|---|
| Protein accession | YP_002360348 |
|---|
| Protein GI | 217976201 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0593] ATPase involved in DNA replication initiation |
|---|
| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAATT TGCGCACCTC CGTCAACGAC AAATCACAGG ATCGCGGCGA CAGCGAAGCA
TGGATGCGCA TCTGCCGCCG ACTGCGCGCC GACGTGGGAG AAGATGTTTT CTCGTCCTGG
TTCGGGCGCC TCGAACTCGA TAGCCTTTCG GACGGAACCG CGGCCCTCTC GGTGCCGACG
AAATTCCTGA AAAGCTGGAT ACAGTCGCAT TACGCTGAAA AGCTGCTTGC GGCGCTGACC
AGCGAATTTC CGATGGTGAA GCGGCTCGTC GTCACGATCC GGTCATCCAA TCGTCCACCG
CTCGGCGCGC CCGCGCGGGC TGACATCGAG GATGAGGAAT CCGGATCGAA TTTGAGCCAG
GGCGCGCGCA AAACGCCGAC TCAGGACGCT GCGGCTTCCG GCGCGAGAGG ATTTGCCGCG
CAGCGGCCGT ATGAGCCGCA AACCGCCAAA ACCCGCGCCG AGGGCGAGGC CGACATCATC
GCCGGTTCGC CGCTGGACGG ACGGCTGACC TTTTCAACCT TCGCGGCGGG TCGCTCGAAC
CAACTGGCGC TCGCCGCGGC GCAGCGGGTC GCCGCCGCGA CGCCAGAGGA GCGGCTGCCC
TATAATCCGC TTTACCTGCA CGCGTCCGTC GGTCTCGGCA AAACCCATCT GTTGCAGGCT
GTGGCCCATA TGGCGCAGAC GATGTCGCGC CGCGTCATCT ATCTGACGGC GGAGCGCTTC
ATGTATGGCT TCGTCTCGGC CCTGAAGGCG CAGACGGCGA TCGCCTTCAA GGAGAAACTG
CGCGGCATCG ATATTCTCGT CATCGACGAC ATTCAGTTCC TGCAGGGCAA ATCGATTCAG
CAGGAGTTCT GCCACACGCT CAATGCCCTG ATCGACGCGC ATCGCCAGAT CGTCATCGCC
GCCGACCGGC CGCCGTCCGA GCTTGAGAGT CTCGACGAAC GGGTGAGGTC GCGCCTTGCC
GGGGGACTCT GCGTCGAAAT CGGCGGCCTC GACGAGCAGC TTCGGGTCAG GATCCTCGAA
GGGCGAATCG CCGCGGCGAA ACACGCCCAC CCCAATTTTG AGGTGCCCTC CGCGGTGACG
GCGTTTGTGG CGCATGCGAT TCAGACCAAC GGCCGCGATC TCGACGGCGC CGTCAATCGC
CTGCTGGCGC ACGCCTCGTT GAACGGCGCT CCGCTCGAAG TCGAGACGGC GGAGCTCGCG
ATTCGCGATC TCGTGCGGGC GCATGACCCA AAACGCATCA AGATCGAGGA TATTCAAAAG
CTCGTCGCGA CCCATTTCAA CGTGAGCCGG GCCGACATCC TGTCTTCGCG GCGCACAGCC
AATGTCGTGC GCCCGCGCCA GATCGCCATG TATCTGTCGA AGGCGCTGAC GCTGCGATCC
CTGCCGGAAA TCGGCCGGCG CTTCGGCGGC CGCGACCATA CCACCGTGCT CCATGCGGTG
CGCAAGATCG ACGGGCTCGC CGCCAAGGAT GGCGCGCTTT CGGAGGAAAT CGAGCTTTTG
AAGCGCATGC TGATGGAATG A
|
|---|
| Protein sequence | MLNLRTSVND KSQDRGDSEA WMRICRRLRA DVGEDVFSSW FGRLELDSLS DGTAALSVPT
KFLKSWIQSH YAEKLLAALT SEFPMVKRLV VTIRSSNRPP LGAPARADIE DEESGSNLSQ
GARKTPTQDA AASGARGFAA QRPYEPQTAK TRAEGEADII AGSPLDGRLT FSTFAAGRSN
QLALAAAQRV AAATPEERLP YNPLYLHASV GLGKTHLLQA VAHMAQTMSR RVIYLTAERF
MYGFVSALKA QTAIAFKEKL RGIDILVIDD IQFLQGKSIQ QEFCHTLNAL IDAHRQIVIA
ADRPPSELES LDERVRSRLA GGLCVEIGGL DEQLRVRILE GRIAAAKHAH PNFEVPSAVT
AFVAHAIQTN GRDLDGAVNR LLAHASLNGA PLEVETAELA IRDLVRAHDP KRIKIEDIQK
LVATHFNVSR ADILSSRRTA NVVRPRQIAM YLSKALTLRS LPEIGRRFGG RDHTTVLHAV
RKIDGLAAKD GALSEEIELL KRMLME
|
|---|
| |