| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2104 |
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| Symbol | |
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| ID | 5104398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 2025982 |
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| End bp | 2027412 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640507994 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001192168 |
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| Protein GI | 146304852 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.609091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGAA CACTCCTTGA GGAATATAAT GTAATGGGAA GTAAGGTCTC CATCATCGAC
GAGGATGGAC AGGGACTCTA CATTGTTGAG GATCCAAGGA TTTCCCGTGA GGAGTCATCG
GCCATATCCT CCATAATGGA TGAGATTTAC TTTTCCTCAA CATCCGTCTC AGACGCGGAG
AATAAGCTAC TGGAAATACT GAAAACGAAA AATATATCTC CAGAATTAAA TGAAAAGATA
CTGAATATAT TTAAAAAGAG AATACTTTAT GATGAAATAA CTGTGCCTGT GATGGATCCT
GAGGTGGAGG AAATTGAGTG TATGGGTCCA GGCTTACCGC TTACCGTAAT TCATAGAAAA
TATTCCAATT ATATGAGGTT ATACACCAAC ATAGTTTTGC CCAAGGAGGA AGATATACTT
AGGATCATAG AAAAACTTGC AATAAAATCA AGTAAATCCG TTAATATTGC TAGACCCTAT
CTCGAATTTT CTCTCCCAGA AGGTCACAGG GTTGCTGCCA CCGTATCCAA TGAGATCTCG
AACCCAGGTT CCACATTCGA TATAAGGAAA TTCCCTGTGT CTCCCATATC CCTAATTAAG
CTGATTAAAG GTAACTCTCT CAGCGTCGAG ATTGCATCCT ATCTATGGTT CTTGCTAGAT
TACAAACCCT TTTATCTGAT AGTGGGGTCC ACAGGTTCAG GGAAAACCAC ATTTCTGAAT
GCCTTGCTAA ACTTCGCTAA TCCAGACGCA AAGATCCTAA GTATTGAGGA TACGCCTGAG
CTTAACCTTA GTGGGAAAAA TTGGATAAGA TTCTTTTCAA GGCAATCCCT AGTCTCGACG
TATGACGTCA CCATTGGTGA GCTATCAAGA CTAGCCTTAA GATATAGGCC AGACTACCTG
ATCATAGGTG AAGTGAGGGG GAAGGAGATT GAGACCCTCA TTCACGCCTC ATCCTCGGGT
CACGCGTCAC TAAGCACTTT TCATGGGGGT AAACCCAGTG ACGTCGTAAC TAGGATTGTA
AGCTTGCTTC CTAAGGAGCT TGCCATAATG TTCCTGAATA ATGTGTGGGG CTTCATTCTA
GTGGGAAGGA GAGTCGATGA AAACGGTAGA ATAATTAAGG CTATAAATGC AATATATGAG
ACGCAAAAGA TCAACGGCAA GACTAAATTC AGAAAAATAG TGTGGTGGTC GTTCAAGGAT
AAAATATATA AGCCAAATAA TTTCAGTGAG CTATTAAAAA TTTCCACTAA ATTAAAGTTT
ATCTCGGATT CGTATGGGTT AAGCAAGTCC GATATCCTTG ACGAACTGGA GAGAAGGAAA
AATGTGATAG AGAAGTTGAT AGCTGAGAAC ATTGCAGACA ACGAGATGAT TCAAGCAGAG
ATAGCCAAAT TCTACAGGGA GAGGGGTCTA AATGTCCAAA GTACGATTTG A
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| Protein sequence | MSRTLLEEYN VMGSKVSIID EDGQGLYIVE DPRISREESS AISSIMDEIY FSSTSVSDAE
NKLLEILKTK NISPELNEKI LNIFKKRILY DEITVPVMDP EVEEIECMGP GLPLTVIHRK
YSNYMRLYTN IVLPKEEDIL RIIEKLAIKS SKSVNIARPY LEFSLPEGHR VAATVSNEIS
NPGSTFDIRK FPVSPISLIK LIKGNSLSVE IASYLWFLLD YKPFYLIVGS TGSGKTTFLN
ALLNFANPDA KILSIEDTPE LNLSGKNWIR FFSRQSLVST YDVTIGELSR LALRYRPDYL
IIGEVRGKEI ETLIHASSSG HASLSTFHGG KPSDVVTRIV SLLPKELAIM FLNNVWGFIL
VGRRVDENGR IIKAINAIYE TQKINGKTKF RKIVWWSFKD KIYKPNNFSE LLKISTKLKF
ISDSYGLSKS DILDELERRK NVIEKLIAEN IADNEMIQAE IAKFYRERGL NVQSTI
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