Gene Msed_0121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0121 
Symbol 
ID5104974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp99260 
End bp99667 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content42% 
IMG OID640506020 
Producthypothetical protein 
Protein accessionYP_001190222 
Protein GI146302906 
COG category[S] Function unknown 
COG ID[COG1371] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000001565 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000415863 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTTTCC AATTCTTCGA TCATACGGCT GACGTGGGAA TCAAGGCTTG GGGAAAGACC 
TTGGAAGAGG CATTTGAGAA CTCGGCGTTG GCAGTATTCG AAATAATGAC CGATACGTCA
AAGATTGAGC CCAAGGTCTC AGTTGACATT GAGGTGGACG GCTATGATCT AGAGAACCTT
TTATACAGGT GGATTGAGTC ACTTCTATTT TACTATGACA CGGAGTTACT GATATTCGGT
AGATTTCAGG TGAAAATAGA CGGGCTGAAA TTGAAGGCAA AGGCTTTTGG TGAAAGATTT
GATGAGACGA AGCATGAAAG GAGAACAGTG GTCAAGGCTA TGACATATCA CGAAATGTCC
ATTAAGACGA ACGGAAATGT AGAGATAACG TTTGTAGTCG ATATTTAA
 
Protein sequence
MGFQFFDHTA DVGIKAWGKT LEEAFENSAL AVFEIMTDTS KIEPKVSVDI EVDGYDLENL 
LYRWIESLLF YYDTELLIFG RFQVKIDGLK LKAKAFGERF DETKHERRTV VKAMTYHEMS
IKTNGNVEIT FVVDI