| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrub_3029 |
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| Symbol | |
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| ID | 8881148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Meiothermus ruber DSM 1279 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013946 |
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| Strand | + |
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| Start bp | 3072410 |
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| End bp | 3074080 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | alpha amylase catalytic subunit |
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| Protein accession | YP_003508793 |
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| Protein GI | 291297395 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.172997 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCGC ACGCCGACAT ACATCTGAAG CTGAAAGACC ACCTCGAGTT CCTCTACCCC
GGCCGGGGCC AGGAAGTGCT GGAGCAGCTC ATGGCCCTGC TCGAGCGCTA CCCCGACCTG
GCCCGGCCCC ACCCCACCCC CCCCTGGAGC GAGCAGGACG CCATCCTGAT CACCTACCCC
GACCAGATCA CCCAGGCCGG CGAACCCCCC CTGCAAACCC TGCACCGCTT CCTGCGCCAG
CACCTCCAGG GCGCCTTCTC CGGGGTGCAC ATCCTGCCCT TTTACCCCTC CACCTCCGAC
GATGGCTTCA GCGTGGTGGA CTTCAAGCAG GTCAAGCCCG GGTGGGGCAC CTGGGAGGAC
ATCCAGGCCA TCGCGGCGGA TTTCCGGCTA ATGGCCGATC TGGTGTGTAA CCACGTCTCG
GCCTCGAGCC CCTGGTTCCA GGCTTTCTTG CAGGGCGACC CCAGGTACCA GAACTACTTC
ATCACCGTGG AGCCCGGCGC CGACCTCTCG CAGGTCTTCC GGCCCCGCGC CCTGCCCCTC
CTCACCCCCT TCCAGACCCA AAGCGGCGAG AAGCTGGTCT GGACGACCTT CTCCACCGAC
CAGATCGACC TCAATTTCGC TCACCCGGAG GTGCTGTTGG AGGTAATAGA TGCCCTGCTG
CACTACGTGC GCAACGGGGC GCAGCTCATC CGCCTCGATG CGGTGGGCTT TATCTGGAAG
GTGATCGGGA CAAGCTGCAT ACACCTGGAA GGGGCCCACC GCATCGTCAA GTTGATGCGG
CTGGTGCTGG ATATAAAAGC CCCCCAGGTG GTGCTGGTTA CCGAGACCAA CGTACCGCAC
CAGGACAACA TCGCGTATTT CGGCAACGGC CACGACGAGG CCCAGATGGT CTACCAGTTC
CCGCTGCCCC CTTTGGTGCT GCACACCTTC CGCACCGGGG ACGCCAGCAA GCTGGCCGCC
TGGGCCGCCA GCCTGAAGCC GCCCTCCGAG CGCACCACCT TCTTCAACTT CCTGGCCTCG
CACGATGGGC TGGGGGTGGT GCCGGCCCAC GGCATTCTGG AGCCCGAAGA AATTGCGGCC
CTCGTCCAGC AAGCCCTGGA CCACGGGGGC CGGGTCAACT ACAAGGACAC CCCGGCGGGC
CCGGTGCCCT ACGAGCTGTG CCTGACCCTG TTCGATGCCC TCAATCATCC CCACGGCGAC
GAGGACGAAG ATCTCAAGAT CGCCCGCTTT CTGGCGGCCC ATGCCGTTCT CCTGAGCTTG
CAAGGTGTGC CGGGGGTCTA CATCCACAGC CTCTTCGGCT CGCCCTCCGA CCACGCGGGT
CTGGCAGAAA GCGGGATTAA CCGCCGCCTC AACCGGCACA GGTTCACCGG GCCGGAGCTG
GCTGGGCTGC TCTCCAACCC CCATTCGCGC GCCCACAGGG TGCTGGCCCG CCTCACCCAC
CTGCTCAGGG TGCGGGCTTC TCACCCGGCC TTCCATCCCA GCGCGCCCCA GGTGGTGATG
GAGTCCAGGG AGGTCTTGCG CATCCTCCGG GGCTACCGCG ACCGGCAGGT GGGGTGCTAC
ATCAACGTGA CCAACCAGCC CCAGCCCATC CGGCGGGTGG GGCGCGACCT GATTAGCGGC
AAATACTTCG CCGGCAGCCT GCCTCCCTAC GGGGTGGTGT GGCTGGTCTG A
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| Protein sequence | MTAHADIHLK LKDHLEFLYP GRGQEVLEQL MALLERYPDL ARPHPTPPWS EQDAILITYP
DQITQAGEPP LQTLHRFLRQ HLQGAFSGVH ILPFYPSTSD DGFSVVDFKQ VKPGWGTWED
IQAIAADFRL MADLVCNHVS ASSPWFQAFL QGDPRYQNYF ITVEPGADLS QVFRPRALPL
LTPFQTQSGE KLVWTTFSTD QIDLNFAHPE VLLEVIDALL HYVRNGAQLI RLDAVGFIWK
VIGTSCIHLE GAHRIVKLMR LVLDIKAPQV VLVTETNVPH QDNIAYFGNG HDEAQMVYQF
PLPPLVLHTF RTGDASKLAA WAASLKPPSE RTTFFNFLAS HDGLGVVPAH GILEPEEIAA
LVQQALDHGG RVNYKDTPAG PVPYELCLTL FDALNHPHGD EDEDLKIARF LAAHAVLLSL
QGVPGVYIHS LFGSPSDHAG LAESGINRRL NRHRFTGPEL AGLLSNPHSR AHRVLARLTH
LLRVRASHPA FHPSAPQVVM ESREVLRILR GYRDRQVGCY INVTNQPQPI RRVGRDLISG
KYFAGSLPPY GVVWLV
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