Gene Mpal_1189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpal_1189 
Symbol 
ID7271467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosphaerula palustris E1-9c 
KingdomArchaea 
Replicon accessionNC_011832 
Strand
Start bp1222478 
End bp1223038 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content47% 
IMG OID643569828 
Productflavin reductase domain protein FMN-binding 
Protein accessionYP_002466252 
Protein GI219851820 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00243403 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.450798 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAAGA TATCGCTTGG TACCAACATG TACCTGTACC CAATGTCGAT CAATCTGATC 
GGTACTAAGA TCGGAGAGAA AGTGAACTTC ATGGCCGTTG GCTTTGTCTC TCGTCTTGAT
ATGAGCCGGC CACTCATCGG GGTGAGTATT AATCGGGAGC ATGAGACCTA TCATACCATC
ATGAAGACAC AGGAGTTCAG TATCAATGTA CCTTCCGCTG ATCTGGTTGA ACGGGTCGAC
TACTGTGGCC TGGTCTCTGG GAAAGACGTC GATAAAACCC CAATATTCGA TATCTTCTAT
GGTATATTAC CAAATGCGCC GATGATCCAG GACTGCCCTG TCTCATTTGA GTGCAAGGTA
GTCAACACTC TGGATTTTGG TTTGAATACA CTGGTGATTG GTGAGATCGT GGCTTCATAT
GCAGATGAGC AGTCACTGAC CGATGGTCAT CCTGACGTGA CAAAGTTCAA ACCTATCCTT
CTGACCATGC CTGACAACCG CTACTGGACC ATCGGTGAAT CCCTGGGTGA TGCCTGGAAG
ATCGGTAAAA CAATGATCTG A
 
Protein sequence
MGKISLGTNM YLYPMSINLI GTKIGEKVNF MAVGFVSRLD MSRPLIGVSI NREHETYHTI 
MKTQEFSINV PSADLVERVD YCGLVSGKDV DKTPIFDIFY GILPNAPMIQ DCPVSFECKV
VNTLDFGLNT LVIGEIVASY ADEQSLTDGH PDVTKFKPIL LTMPDNRYWT IGESLGDAWK
IGKTMI