| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1960 |
|---|
| Symbol | |
|---|
| ID | 4481188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 2438774 |
|---|
| End bp | 2439724 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 639722710 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_865874 |
|---|
| Protein GI | 117925257 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.222208 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTGGT TTAGCCGAGG AATTGTTCTG GTCTGTCTAT TGCTGTTGTC TTGGCAACTG
TACCAGCATG GTGGATATTT TTTGCGTCAC GAACGGTGGG GATGGTCCCT GTTTGGCATA
CTGTTTTTTG CCTCTTTGCT CTATGCCGTG ATTTGCACCC TGTTGGGCAT GGGTTGGATC
GCTCTGCTGC GAGGGTTGGG TGATCGAACA TTGGCTTCAC AACTTTATGT AATTTATACA
AAGTCACATA TTGCCAAATT TCTTCCGGGT AACATCTTTC ACTATGCAGG ACGGTTTGCA
CTGGGCCGGT TGGCCGGGGT GGCCCATGCG CATACAACAC TGGCCTCCAT GGGGGAGTTA
GCCTCATTAG GGTTGATGGC CATCCTGTTA ATGCTCTTCA CCCTCCCTCG CCCCCTGGTA
CTGCAACATG ATGCTTTCAC TTGGGCTGCC GGGCTCTTTC TGGGGTTACT GCTGCTTACT
ACGCTATTGA TTTTAAGTTG GTGTCGCCAA GGTTGGGTTG TCAGGTTTTT TGAAAATCGT
CTGGGCATGC AATTTACAGT ACCCTGTGGC TACCCTATCC TTTTGGGAGG CCTTGGTGCT
GCCATGGGGC ATTTATTATT TTTTATCGCT GTGGGTGCAC TTACTCTATG GTTGGCAAAT
CAACTGGGCG GAGCAGCTGA GCTATGGCCC CAGGTACTGG GAATTTATGC GTTATCATGG
TTACTTGGTA CCGCTACGCC GGGCAGCCCA GGTGGGGTTG GGGTTAGAGA GGTTGTCTTG
GTTGCGGCGC TCAGTCAAAT GATGGGCGAA CCACAAGCTT TGATGTTGGC ACTGATGCTA
CGGGTGGTTA CGACGGTTGG GGACTTCGGG TTTTGGGCTG GTGGTTTGCT GGTTGAGCGC
GTCAACACGG CAGTTCCCGT TAACACCATG CGTAGCCATC GAGATATGTG A
|
|---|
| Protein sequence | MSWFSRGIVL VCLLLLSWQL YQHGGYFLRH ERWGWSLFGI LFFASLLYAV ICTLLGMGWI
ALLRGLGDRT LASQLYVIYT KSHIAKFLPG NIFHYAGRFA LGRLAGVAHA HTTLASMGEL
ASLGLMAILL MLFTLPRPLV LQHDAFTWAA GLFLGLLLLT TLLILSWCRQ GWVVRFFENR
LGMQFTVPCG YPILLGGLGA AMGHLLFFIA VGALTLWLAN QLGGAAELWP QVLGIYALSW
LLGTATPGSP GGVGVREVVL VAALSQMMGE PQALMLALML RVVTTVGDFG FWAGGLLVER
VNTAVPVNTM RSHRDM
|
|---|
| |