Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1202 |
Symbol | |
ID | 4481195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 1497890 |
End bp | 1498780 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639721945 |
Product | nitrogenase iron protein subunit NifH |
Protein accession | YP_865119 |
Protein GI | 117924502 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.451718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00669218 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCACTGC GTCAATGCGC AATTTACGGC AAAGGTGGTA TCGGCAAATC CACCACTACC CAGAACCTCG TTGCGGGTCT GGCCGAAGCT GGTAACAAAA TCATGATCGT TGGCTGTGAC CCCAAAGCGG ACTCCACCCG CCTTATTCTG CACGCCAAAG CGCAAAATAC CATCATGGAA ATGGCTGCTC AAGCGGGTTC TGTGGAAGAC CTGGAATTGG AAGATGTGCT GAAGGCTGGT TTTGGCGGCA TCAAGTGTGT TGAGTCCGGC GGTCCTGAGC CTGGTGTGGG TTGTGCAGGC CGTGGTGTTA TCACCGCCAT CAACTTCCTG GAAGAAGAAG GCGCTTACGA AGAAGATCTG GACTTTGTGT TCTATGATGT GTTGGGTGAC GTGGTGTGCG GTGGTTTCGC CATGCCCATT CGTCAAAACA AAGCTCAAGA GATCTACATT GTGGTCTCCG GCGAGATGAT GGCCATGTAC GCCGCCAACA ACATCGCCAA AGGTATTGTG AAGTATGCAA GCTCCGGCAA CGTGCGTCTG GCTGGTCTGA TCTGCAACTC CCGTAACGTG GACCGTGAAG ACGAGCTGAT CGAAGCGCTG GCCGCTGCCC TTGGCACCCA GATGATCCAC TTCGTGCCCC GCGACAACGT GGTGCAACGC GCTGAGATCC GTCGTATGAC TGTGATCGAG TATGATCCCA AGTCCAAGCA AGCCGACGAG TATCGCACCC TCTCCAACAA GATCTACAAC AACAAAAACT TTGTTGTGCC CACGCCCTTG ACCATGGATG AGTTGGAAGA TCTGCTCATG AAGTACGGCA TGATGGAAGA AGAGGACGAA ACCATCGTCG GTAAGACGGC TGAAGAAGAA GCCGCTGCCG CCACTGCCTA A
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Protein sequence | MALRQCAIYG KGGIGKSTTT QNLVAGLAEA GNKIMIVGCD PKADSTRLIL HAKAQNTIME MAAQAGSVED LELEDVLKAG FGGIKCVESG GPEPGVGCAG RGVITAINFL EEEGAYEEDL DFVFYDVLGD VVCGGFAMPI RQNKAQEIYI VVSGEMMAMY AANNIAKGIV KYASSGNVRL AGLICNSRNV DREDELIEAL AAALGTQMIH FVPRDNVVQR AEIRRMTVIE YDPKSKQADE YRTLSNKIYN NKNFVVPTPL TMDELEDLLM KYGMMEEEDE TIVGKTAEEE AAAATA
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