| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0971 |
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| Symbol | |
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| ID | 4480493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 1185431 |
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| End bp | 1187206 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639721719 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_864895 |
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| Protein GI | 117924278 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00189563 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTAACAC CCCAGGCTTT GGCTCTGACC CCAGAACGAC AGGATGCCTC GACAGCTGAA
CAGGAACAAT GGCTCACCCG ACTCACCCGC CATTATGTCC ATACCAACTT GGCGCTACCC
CAGCCCGGCG TCTACCAAAA AACCATTGAC CTGCTCAGGC AAGAGCTTGA GCGGCTCTTT
TTAAATGCAC CCGCAGACCT TATGTTCACC CCCAAGCTGC GGGCTGCTTT ACAAAGCCTT
GCCCACGGCG ACCTTGACGC CACCCAACGT CAAATCGCCC TCTTGGATCA ATCTTTTAAT
CATGCTTACA ACAAATACCA TCCGCTCTAT TTACCCCTTT ACCGACTACA AGCGGCGCTA
CAGCAACAAC AAGGTAACCC GGCGGAAGCC CTCACGACCC TAGAAAAACT GCTACAACTT
GAAGAGCGAC TACTCAGCGA TAGTCATCCT GCCCTCTACC GAACCTTATT AAACATGGGC
GACTTGCTGA TTTTGCTCAA CCGCATGGAG GCCGCCAAGG GTTACTATGA GCGAGCCTTG
ACCCTATTCA TGAAAAACCC TGGCCCCTAT CAACAGGCCC GCATAACTCT GCTTAACCGT
TTAAGCCAGA TTGAGATGGC CGCACACCGC CCCAAACAGG CGGTACTGCG CTTAGGCACG
GCGCTCTCCA TGGAAGAGGC CCGTCTGGGC CATGAGCACC CTGCCCTCAT CACCACGCTG
GATCAACTGG CCACGGCCCT AACCCTAGCC GGTCGTCAAT CTGAAGCGAT CAAGCAGATT
GAACGCGCCC TTGCCATCTG CACCACCCAG TTAGGGGGAA ACCCCATGCT CACCGCCCAA
CTTACCGGTC GTTTGGGGGA TCTGGCCGTA GAACAGCAGC AGATGGCACA AGCCGGTCAT
TTTTACCAAG CTGCCTTGCA TACCTTAACC ACAACCCATT TAACAGAAAA CGACCATTTC
CCCACACTCA AACTAAAGCA GGCTTTTATT CATCAAATTT TAGGGGAGTG GTGGCAAGGC
GAGTTGGCTC AACGCACCGG TTTAATGGGG CTACAGGCCC ACCCACCCCC ACCCGGTAGC
CAGATTAGCC TTAACCGCGA GGTTGCCACC TATCGCCAGC TTATCCAGGC ACTCAACACC
TTAATTTGGA ATACCGACAC ACAACCAGAC AATCTGAAGG GGGCCATTCT TACCCTCCAG
CAACGCCTCA AGGATCTGGG TTTCAATCCC GGTGAGATGG ATGGACATCC AGGCCCCAAC
ACCTTGGCCG CACTCACCGC CTGGCGCAAT GCCCTGGGCA TTGCTGCCCC CCCCATGCGT
TGGCGTTTGA GCACCCTGCA ACGCGCCTTG CAAGAGGTAC CGCCCGCACC GCGCCCCACG
CCAAATGATT TGGTGGATAT GATTCGCCAC GAGCAGGCAA TGTCAGAGCA GCACACCACC
GAAGAGCCCC TGGACTCCAC CAGCGCCATC ACCGACAAAC AACGTGCGGA GGCGGCCGCC
AAAGCTGCTG ACGCTGCCGC CGCCCCCCCG CGCCAGGAAG CCGCCACCCC GGCGGTTGAC
CAGCCAAGCC CAGACGCTAT AAAACCCCCT ACCGTGATCT CCAACACACC CTCGGCGCCA
GTTGCCGCAC CCACAAAACC TGCTGCCCCT GAGACCCACG GCACGCCGTT GCAACCCACC
GAGGCTGCCA GCCATAAACG GCATCCGCAA CCCACGGCAC CCGCAACAGT TCTACCCGCT
ACGGGACAAA CGGCCCACCC GAGCACTGGA GATTGA
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| Protein sequence | MLTPQALALT PERQDASTAE QEQWLTRLTR HYVHTNLALP QPGVYQKTID LLRQELERLF
LNAPADLMFT PKLRAALQSL AHGDLDATQR QIALLDQSFN HAYNKYHPLY LPLYRLQAAL
QQQQGNPAEA LTTLEKLLQL EERLLSDSHP ALYRTLLNMG DLLILLNRME AAKGYYERAL
TLFMKNPGPY QQARITLLNR LSQIEMAAHR PKQAVLRLGT ALSMEEARLG HEHPALITTL
DQLATALTLA GRQSEAIKQI ERALAICTTQ LGGNPMLTAQ LTGRLGDLAV EQQQMAQAGH
FYQAALHTLT TTHLTENDHF PTLKLKQAFI HQILGEWWQG ELAQRTGLMG LQAHPPPPGS
QISLNREVAT YRQLIQALNT LIWNTDTQPD NLKGAILTLQ QRLKDLGFNP GEMDGHPGPN
TLAALTAWRN ALGIAAPPMR WRLSTLQRAL QEVPPAPRPT PNDLVDMIRH EQAMSEQHTT
EEPLDSTSAI TDKQRAEAAA KAADAAAAPP RQEAATPAVD QPSPDAIKPP TVISNTPSAP
VAAPTKPAAP ETHGTPLQPT EAASHKRHPQ PTAPATVLPA TGQTAHPSTG D
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