| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0363 |
|---|
| Symbol | thrS |
|---|
| ID | 4481223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 416837 |
|---|
| End bp | 418783 |
|---|
| Gene Length | 1947 bp |
|---|
| Protein Length | 648 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639721111 |
|---|
| Product | threonyl-tRNA synthetase |
|---|
| Protein accession | YP_864295 |
|---|
| Protein GI | 117923678 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0441] Threonyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0255987 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGAGA TTATACTTCC CGATGGCAGC AGCCGCTCCT ATGACCAAGA GACGCTGACC
TGTGGTCAGA TTGCGGCCTC CATTGGCAAA GGGTTGGCGA AGGCGGCCAT TGCCGGGGTG
GTGAATGGGC AAAAGGTGGA TCTAGATGCG CCGGTGCCCC ATGGTGCCCA GGTGGCGATT
ATTACGGAAG ATAGCCCAGA GGGCTTGGAG ATCATTCGCC ACTCTGCAAG TCATTTGATG
GCGCAGGCGG TTAAAACCTT GTTTCCTCAA GCGCAAGTGA CCATTGGTCC TGCCATAGAA
AACGGGTTTT ATTACGATTT TGATTATGAG CGACCCTTTA CCCCGGATGA TTTAACCGCC
ATTGAAAACT GCATGCGCAA GTTGGCCAAG CGCAATGAAA AGGTTGAGCG GCGGGTGATG
CCCCGTGATG AAGCGGTGGC CTATTTTCAG GCGATGGGCG AGCTCTACAA GGCAGAGATT
ATTGGGGCGA TCCCGGCGGG GGAGGATGTC TCCCTTTATA GCCAGGGTGA GTTTACCGAT
CTATGTCGGG GGCCCCATGT GCCCAGCACC GGTAAGTTAA AGGCGTTTAA GGTGATGAAG
GCGGGGGGTG CCTACTGGCG TGGGGATTCT CGCAATAAAA TGTTGCAGCG CATCTACGGT
ACCGCCTGGG CGACAGAGGC TGATTTAAAG GCCTATCTGA CCCAGATGGA AGAGGCCGAG
AAGCGGGATC ATCGGCGTAT TGGCAAGGAT CTGGATCTCT TCTCGGTGCA GGAGGATGCG
GGGGGTGGTT TGGTTTTTTG GCACCCCAGG GGTTCGCGCA TTCGCCGGGT GATTGAGGAT
TTTTGGAAAG ATCGCCATGT CGAGGCGGGT TATGAGTTCC TCTACACGCC ACATATTGCC
AATCGGCAGT TGTGGAACAC TTCTGGGCAC ACCGATTTTT ATTCGGATTC GATGTTTTCG
CCCATGGAGG TCGATGAACA GGCGTACCAG ATTCGCCCCA TGAACTGCCC GTTTCATATC
CTGATTTACA AGGATCGGCG GCACTCCTAT CGTGAGCTAC CGTTCCGTTG GGGAGAGTTG
GGCACGGTCT ACCGTTATGA GATGTCTGGG GCGTTGCATG GCCTGTTTCG GGTACGGGGT
TTTACCCAGG ACGATGCCCA TATCTTCTGC ACAGAACAGC AGATTGAGGA GGAGATTCAG
CGGATTTTGG ATTTGACGCT GGATATTCTG CGCACCTATG GCTTTAGTGA TTTTGAGATC
AACCTTTCCA CCCGTCCGGA GAAGTCGGTG GGGAGTGCGG CGATCTGGGA CAAAGCGACT
GAGGCGCTGC GGCGGGCCAT TGTCTCGCGG GATCTGAGCT ATGTGGTAGA TGAGGGCGGT
GGCGCGTTTT ATGGCCCTAA AATTGATGTT AAGATAACCG ACTCCATTGG GCGCAAGTGG
CAGTGTTCGA CGGTGCAGTT GGATTTTAAT CTGCCTGAGC GGTTTGATAT GGGCTATATT
GGCGAGGATG GCGAGAGTCA TCGTCCCATT ATGATCCACC GGGCATTGAT GGGTTCGTTG
GAGCGCTTTT TTGGCATTTT GGTGGAGCAC TATGCGGGGT GGTTTCCCAT GTGGTTGGCT
CCAGTGCAGG CGGTGGTGTG TAGCATTACC GATGCACAGC ATGCTTATGC TGAAACGGTG
TTGGCAGCGT TGAAAAAAGC GGGCTTGCGG GTAGAAATCG ACCTACGTAA TGAAAAAGTG
GGTTATAAAA TTCGCGAACA TACGCTAAAA AGGGTACCTT ACCTATTGGT GGTGGGGGAT
AAGGAGCGGG AAGAGGGGAC GGTTAACGTT CGTCTACGCT CTGGCAAGAG TTTGGGTAGT
CTGCCTATAC AAGATGTGGT TGAGCGTCTT GTGGAGGAGG CCGCCAGTCG TGCCCTTTCT
GCTTCGGAAG ATCAGGAAGA GGCGTAA
|
|---|
| Protein sequence | MVEIILPDGS SRSYDQETLT CGQIAASIGK GLAKAAIAGV VNGQKVDLDA PVPHGAQVAI
ITEDSPEGLE IIRHSASHLM AQAVKTLFPQ AQVTIGPAIE NGFYYDFDYE RPFTPDDLTA
IENCMRKLAK RNEKVERRVM PRDEAVAYFQ AMGELYKAEI IGAIPAGEDV SLYSQGEFTD
LCRGPHVPST GKLKAFKVMK AGGAYWRGDS RNKMLQRIYG TAWATEADLK AYLTQMEEAE
KRDHRRIGKD LDLFSVQEDA GGGLVFWHPR GSRIRRVIED FWKDRHVEAG YEFLYTPHIA
NRQLWNTSGH TDFYSDSMFS PMEVDEQAYQ IRPMNCPFHI LIYKDRRHSY RELPFRWGEL
GTVYRYEMSG ALHGLFRVRG FTQDDAHIFC TEQQIEEEIQ RILDLTLDIL RTYGFSDFEI
NLSTRPEKSV GSAAIWDKAT EALRRAIVSR DLSYVVDEGG GAFYGPKIDV KITDSIGRKW
QCSTVQLDFN LPERFDMGYI GEDGESHRPI MIHRALMGSL ERFFGILVEH YAGWFPMWLA
PVQAVVCSIT DAQHAYAETV LAALKKAGLR VEIDLRNEKV GYKIREHTLK RVPYLLVVGD
KEREEGTVNV RLRSGKSLGS LPIQDVVERL VEEAASRALS ASEDQEEA
|
|---|
| |