| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1719 |
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| Symbol | aroE |
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| ID | 5737461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | - |
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| Start bp | 1616998 |
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| End bp | 1617837 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 641284220 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001549763 |
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| Protein GI | 159906101 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.049913 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAGATT CCAAAACAAA ACTAATCGGA CTTATTGGAC ATCCTGTAGA ACATTCATTT
TCACCGATAA TGCATAACGC CGCAATTAAA GATCTTGGAA TAAACTATAC ATACCTTGCA
TTTGATGTTT CAGAAGAAAA TCTAAAATAT ATTGTATCGG GTGCAAAAGC ACTCCAAATT
GCAGGTTTTA ACGTTACAAT ACCTCATAAA ATAAACATTA TGAAATATTT GGACGAAATT
GATGAAGATG CAAAATCAAT TGGTGCAGTA AATACTGTAA AAATTGAAAA TGGAAAAACA
ATTGGATATA ACACTGACGG AATTGGTGTA AAGAGAGCAC TTGAAGAAAA AAGTGGAATT
TTAATTAATA AAAACATTTT AATTATAGGT TCAGGAGGTG CTTCAAGAGC TGTTTCTTTT
GAACTTGCAA AAGAAAATAA TTTAACAATT GTAAACAGAA ATATTGAAAA AGCGAAAATT
CTTTCTGAAG AACTTTCTAC AAAATTAAAA AAAGAAAATT CGATAAAATA CGGAGCATTG
AATATAGATA TAAAAAATTT TGATATAATT ATAAATACAA CGCCGGTTGG AATGTATCCC
GACACAGATG TAAATCCAGT AATTCCGTTG AATGATATAA AAAAAAGTGC TGTTGTGATG
GATTTAATAT ACAATCCCCT TGAACCTGTG TTTTTAAAAG AAGCTATGAA ATATGGTGTA
GAAACTATAA ATGGTCTTGG AATGCTTGTA TATCAGGGAG CTGTTTCCTT TCAGATATGG
ACTGGAAAAA AACCAGATGT ATATGTGATG AAAAAAGCTA TTAACTCAAA AATTAGATAG
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| Protein sequence | MIDSKTKLIG LIGHPVEHSF SPIMHNAAIK DLGINYTYLA FDVSEENLKY IVSGAKALQI
AGFNVTIPHK INIMKYLDEI DEDAKSIGAV NTVKIENGKT IGYNTDGIGV KRALEEKSGI
LINKNILIIG SGGASRAVSF ELAKENNLTI VNRNIEKAKI LSEELSTKLK KENSIKYGAL
NIDIKNFDII INTTPVGMYP DTDVNPVIPL NDIKKSAVVM DLIYNPLEPV FLKEAMKYGV
ETINGLGMLV YQGAVSFQIW TGKKPDVYVM KKAINSKIR
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