Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_1250 |
Symbol | |
ID | 4929082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | + |
Start bp | 1194295 |
End bp | 1195467 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640166741 |
Product | geranylgeranyl reductase |
Protein accession | YP_001097762 |
Protein GI | 134046277 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.375977 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGGCTT TAAACAATAG CTATGATGTA GTTGTAGTTG GTGCAGGGCC TGCGGGCAGT ATGGCTTCTT ACAACGCATC CAAAAATGGG GCAAAGACAC TTTTACTTGA AAAATCCCAA GAAATCGGAA CGCCGGTCAG GTGCGCTGAA GCAGTTCCAA GACTTGAAGA CTTTGGAATT AATCCAGATC CGTCATTTGT TAGATCGTAT ATTAAGGGCG GATATTTAAT CGCTCCAAAC GGTAAACAAG TAGTCGTAAA AGGCGGAAAA ACGGACGGCT ACGTTGTTGA AAGAAAAGTA TTTGATAAAT ACCTCGCAAT AAGAAGCGGG CAGGCAGGAA CGCAGATCGC AGTCAAAAGC AGAGTTACAG GAATTGAAAA AACAGATGAT GGATACAACG TATTTGTAAA CTACCTTGGG GACGAATACA TTGTTAAAAC AAAAATCGTA ATTGCTGCAG ATGGTGTTGA AAGTAACATT GCAGAATACG CTGGATTAAA ATCAAAGAAA AGTCATAAAG AAATCTGTTC ATGTGCAGAA TACGAAATGA CCAATGTAAA ATTATTAGAC AACGAAATGA TGGAATTTTA TTTTGGTGAC ATATGTCCTA AAGGATACAT CTGGTTATTT CCAAAAGGTG ACACCGTAAA CGTAGGTATC GGCATCATTG ATAGCAAAAA AAGAGCAATT GATTACTTAG ATGAGTTTTT AACTAATCCA TTAGTTAAAG GAAGGCTTGA TAATGCAGTT CCCGTTGAGT TCAAAGTTGG TGGGGATCCG GTAGGTGGCC CAATTGAAAA AACAGTTGCT GACAACATCA TGGTTGTAGG AGATGCTGCA GGACACGTTA GTCCACTTAC AGGTGGAGGA ATAGGCCTTT CAATGTCTTG TGGTTTGATG GCAGGAGATG TTGCTGCACA AAGTATCAAA GCAGAAGACC ATTCAAGAGA GTTTTTAAGT GCTTATGAAA AAAGATGGAA AGAAAAATAC TACAAACCAT TGATGAAAGA CCTTAAATAC AAAACAATCC TTCAAAAATT AAGTGATGAG GAATTGAATG CAATTGCTGA TTCAATACCT GAAAATTTAG AAGAAGTGGA TGTTGGAAAG CTTGCAGTAA AAATAGTTGC AAAAGCTCCA TCCTTATTAA GACATTTTAA AGAATTAATT TAA
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Protein sequence | MRALNNSYDV VVVGAGPAGS MASYNASKNG AKTLLLEKSQ EIGTPVRCAE AVPRLEDFGI NPDPSFVRSY IKGGYLIAPN GKQVVVKGGK TDGYVVERKV FDKYLAIRSG QAGTQIAVKS RVTGIEKTDD GYNVFVNYLG DEYIVKTKIV IAADGVESNI AEYAGLKSKK SHKEICSCAE YEMTNVKLLD NEMMEFYFGD ICPKGYIWLF PKGDTVNVGI GIIDSKKRAI DYLDEFLTNP LVKGRLDNAV PVEFKVGGDP VGGPIEKTVA DNIMVVGDAA GHVSPLTGGG IGLSMSCGLM AGDVAAQSIK AEDHSREFLS AYEKRWKEKY YKPLMKDLKY KTILQKLSDE ELNAIADSIP ENLEEVDVGK LAVKIVAKAP SLLRHFKELI
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