Gene MmarC5_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1250 
Symbol 
ID4929082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp1194295 
End bp1195467 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content38% 
IMG OID640166741 
Productgeranylgeranyl reductase 
Protein accessionYP_001097762 
Protein GI134046277 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID[TIGR02032] geranylgeranyl reductase family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.375977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGCTT TAAACAATAG CTATGATGTA GTTGTAGTTG GTGCAGGGCC TGCGGGCAGT 
ATGGCTTCTT ACAACGCATC CAAAAATGGG GCAAAGACAC TTTTACTTGA AAAATCCCAA
GAAATCGGAA CGCCGGTCAG GTGCGCTGAA GCAGTTCCAA GACTTGAAGA CTTTGGAATT
AATCCAGATC CGTCATTTGT TAGATCGTAT ATTAAGGGCG GATATTTAAT CGCTCCAAAC
GGTAAACAAG TAGTCGTAAA AGGCGGAAAA ACGGACGGCT ACGTTGTTGA AAGAAAAGTA
TTTGATAAAT ACCTCGCAAT AAGAAGCGGG CAGGCAGGAA CGCAGATCGC AGTCAAAAGC
AGAGTTACAG GAATTGAAAA AACAGATGAT GGATACAACG TATTTGTAAA CTACCTTGGG
GACGAATACA TTGTTAAAAC AAAAATCGTA ATTGCTGCAG ATGGTGTTGA AAGTAACATT
GCAGAATACG CTGGATTAAA ATCAAAGAAA AGTCATAAAG AAATCTGTTC ATGTGCAGAA
TACGAAATGA CCAATGTAAA ATTATTAGAC AACGAAATGA TGGAATTTTA TTTTGGTGAC
ATATGTCCTA AAGGATACAT CTGGTTATTT CCAAAAGGTG ACACCGTAAA CGTAGGTATC
GGCATCATTG ATAGCAAAAA AAGAGCAATT GATTACTTAG ATGAGTTTTT AACTAATCCA
TTAGTTAAAG GAAGGCTTGA TAATGCAGTT CCCGTTGAGT TCAAAGTTGG TGGGGATCCG
GTAGGTGGCC CAATTGAAAA AACAGTTGCT GACAACATCA TGGTTGTAGG AGATGCTGCA
GGACACGTTA GTCCACTTAC AGGTGGAGGA ATAGGCCTTT CAATGTCTTG TGGTTTGATG
GCAGGAGATG TTGCTGCACA AAGTATCAAA GCAGAAGACC ATTCAAGAGA GTTTTTAAGT
GCTTATGAAA AAAGATGGAA AGAAAAATAC TACAAACCAT TGATGAAAGA CCTTAAATAC
AAAACAATCC TTCAAAAATT AAGTGATGAG GAATTGAATG CAATTGCTGA TTCAATACCT
GAAAATTTAG AAGAAGTGGA TGTTGGAAAG CTTGCAGTAA AAATAGTTGC AAAAGCTCCA
TCCTTATTAA GACATTTTAA AGAATTAATT TAA
 
Protein sequence
MRALNNSYDV VVVGAGPAGS MASYNASKNG AKTLLLEKSQ EIGTPVRCAE AVPRLEDFGI 
NPDPSFVRSY IKGGYLIAPN GKQVVVKGGK TDGYVVERKV FDKYLAIRSG QAGTQIAVKS
RVTGIEKTDD GYNVFVNYLG DEYIVKTKIV IAADGVESNI AEYAGLKSKK SHKEICSCAE
YEMTNVKLLD NEMMEFYFGD ICPKGYIWLF PKGDTVNVGI GIIDSKKRAI DYLDEFLTNP
LVKGRLDNAV PVEFKVGGDP VGGPIEKTVA DNIMVVGDAA GHVSPLTGGG IGLSMSCGLM
AGDVAAQSIK AEDHSREFLS AYEKRWKEKY YKPLMKDLKY KTILQKLSDE ELNAIADSIP
ENLEEVDVGK LAVKIVAKAP SLLRHFKELI