| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0972 |
|---|
| Symbol | |
|---|
| ID | 4928270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | - |
|---|
| Start bp | 944061 |
|---|
| End bp | 944645 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640166470 |
|---|
| Product | rubrerythrin |
|---|
| Protein accession | YP_001097493 |
|---|
| Protein GI | 134046007 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1592] Rubrerythrin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.367114 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCAAAAAA CAATCGAAAA TCTTTCAAAA TCATTTATTG GGGAAAGTCA GGCTAGAAAT
AGATATACAA TCTACGCAAA GATAGCTCAA AAAGAAGGCT ATGAAAAAAT AGCTGAAATA
TTTACAATGA CTGCAGAACA AGAGCGAGAG CATGCGAAAT GGTTATTTAG ATTAATCGAT
TCGCTTAAAA AAGACAATGG CAACCCTGCT GAAATCATAA TCGATGGAGC AGCCGTTCCA
ACCGCATATG GAACAACAAT AGAAAATTTA AAGGAAGCTG CATCTGGGGA AAATTACGAA
CATACAGAAA TGTATCCAGA ATTTGCAAAA ATAGCAAAAG AAGAAGGATT AACAGAAATT
TCAGATAGAC TTCTTGCGAT TGCTGAAGCT GAAAAACACC ACGAACAAAG GTACAAAAAA
TTAATTGAGC AAATTGAAAA AGATTCAATG TTCAAAAAAG ATGAAGAGAT ATACTGGACC
TGTAGAAAGT GCGGATACTT AGTAAAAGAC AAAAATGCGC CAGTTGAATG CCCTTCATGC
GGACACCCGA CAGCTTACTT TGAAAAGCAA TGCGAAGAAT ATTAA
|
|---|
| Protein sequence | MQKTIENLSK SFIGESQARN RYTIYAKIAQ KEGYEKIAEI FTMTAEQERE HAKWLFRLID
SLKKDNGNPA EIIIDGAAVP TAYGTTIENL KEAASGENYE HTEMYPEFAK IAKEEGLTEI
SDRLLAIAEA EKHHEQRYKK LIEQIEKDSM FKKDEEIYWT CRKCGYLVKD KNAPVECPSC
GHPTAYFEKQ CEEY
|
|---|
| |