| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0067 |
|---|
| Symbol | |
|---|
| ID | 4927523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | - |
|---|
| Start bp | 58399 |
|---|
| End bp | 59157 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 640165565 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001096599 |
|---|
| Protein GI | 134045113 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.571905 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAT TATATATGGT ATTGTTAACA CTGCTCAGCC CCCTTTCAAA TGTCGTCGAT
ATTGAAAACG AATATCAAAT TACCGGCGTT TTGACTGTTG GAGTATATCC TGATCTAACC
CCATATACCT ATGAAGAAAA CGGGGAATTA AAGGGGTTTG AGATTGATTT GATAAATGAA
ATAGCCAAAA GAATCGAGGT AACTCCAGAA TTTATACTAT ATAATTACAC TAACGAACCA
TACGAAGCGG TAAAAAACAA ACAAATAGAT TGTGCAATAT CTTCAAACTT TTTATCACGT
AATAATGACA ATATAGAATA TTCGAGAACG TATTTAAGTA CCTATGAAGT ATTAATGTGT
GAAAAAAGTC AGAAATTCTT CAGACTCGAA GATTTGAAAG ATAAAAAAAT AGGAGTACTT
AAAAATTCTA AAGCTGAAGA AAAAGCGAAA TATCTTCTTA GAAGTATGAA TTTTGAAATA
ATAACTTATG ACAATCCAAA AGATATTGAA AATGACATTG GATCTGGAAA TTTAGATGCT
GCAATTTCAG ATAAACACCA CCTGAATTAC ATTCAGAAAG AAAGTGATTC ATTGAAATTT
GTCCAAGAAC TCGACATCAA ATACGTGAGT ATGGTAATAA ATTCTAAAAA CCCTGAATTA
ACTGAAAAAA TTGATGAAAT TCTTCTGGAA ATGGAAGAAG ATGGAACATA TCAAGAAATA
TACGATAAAT GGTTTGGAAA TCTAGAAAAA TCTCTTTAA
|
|---|
| Protein sequence | MKSLYMVLLT LLSPLSNVVD IENEYQITGV LTVGVYPDLT PYTYEENGEL KGFEIDLINE
IAKRIEVTPE FILYNYTNEP YEAVKNKQID CAISSNFLSR NNDNIEYSRT YLSTYEVLMC
EKSQKFFRLE DLKDKKIGVL KNSKAEEKAK YLLRSMNFEI ITYDNPKDIE NDIGSGNLDA
AISDKHHLNY IQKESDSLKF VQELDIKYVS MVINSKNPEL TEKIDEILLE MEEDGTYQEI
YDKWFGNLEK SL
|
|---|
| |