Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0034 |
Symbol | |
ID | 4928287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | + |
Start bp | 27051 |
End bp | 27641 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 640165531 |
Product | haloacid dehalogenase superfamily protein |
Protein accession | YP_001096566 |
Protein GI | 134045080 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2178] Predicted RNA-binding protein of the translin family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAAAATA GATCTTATTT AATAGAATTC TTTGAAAAAA AGAATAATAC CAGGGAAAAA ATTTTGAAGA TTTCAAGGGA AATTGTAAAG GATTCGGGAC TCATTATTCG AAAAATACAG AAAGGAACTG AGGTAGATTT TACAGATATT GAAGAAAAAT TAAAAGAATT AAAAAACTTT TCAGAAGATC ACTTCGAATT CCAAAAATAT AGGGGAACTC CTGAACAGGA GTATGTCGAA ACACGAGTTT ATTATTCGAT AATTTTTGAA AATAAAATTT TGGATTTTTT TGATTTTGAT AATATCTTGG AAGAAAGCTA TATTTTGGGT TTGTGTGACG TTATCGGCGA ACTTAGAAGA ATAATTCTTG AATCAATTCG AAAAGACGAA AAAACAAAAG CAGAACTTTA TTTTGAATAT ATGAATAAAA TTTACGACTT TTTAATGGAA TTTGATAATT ACCACGTAAT TGATGGACTT AGGAGAAAAC AAGATGTTTC AAGAAGTTTA ATTGAAAAAA CTCACGGAGA TATAATTAAT TTCAACGAAA ATCTGAAACT TAGAATAGAA CTTTCAAAAT TTAATAAATA A
|
Protein sequence | MKNRSYLIEF FEKKNNTREK ILKISREIVK DSGLIIRKIQ KGTEVDFTDI EEKLKELKNF SEDHFEFQKY RGTPEQEYVE TRVYYSIIFE NKILDFFDFD NILEESYILG LCDVIGELRR IILESIRKDE KTKAELYFEY MNKIYDFLME FDNYHVIDGL RRKQDVSRSL IEKTHGDIIN FNENLKLRIE LSKFNK
|
| |