| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0033 |
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| Symbol | rpl3p |
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| ID | 4928358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | - |
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| Start bp | 25780 |
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| End bp | 26784 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640165530 |
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| Product | 50S ribosomal protein L3P |
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| Protein accession | YP_001096565 |
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| Protein GI | 134045079 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03626] archaeal ribosomal protein L3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.555828 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTATGA AAAAAAATAG ACCTCGTAGA GGTTCCCTAG CATTTAGCCC AAGAAAAAGA
GCTAAGAAAT TAGTTCCTAA AATCAGATCA TGGCCTGCAG ACAAAAAAGT AGGACTCCAA
GCATTCCCTG TATACAAAGC AGGAACAACA CATGCTTTAT TGATCGAAAA CAACCCTAAA
AGTCCAAACA ATGGTCAGGA AGTATTTACA CCTGTAACCG TATTAGAAAC ACCGGACGTT
ACCGTAGCAG GAATCAGACT CTACGAAAAA ACAACCAAAG GGTTAAAAGC ATTAACTGAA
GTATGGGCTG AACAGTTAGA CGGCGACTTA GGAAGAAAAT TAACTTTAGC TAAAAAAGAA
GAGAAAAAAA CTGCTGATGC TTTGGATGCT GTTGTAGAAA AAGCTACAGA AGTTAGAGCT
ATTGTTCACA CAAACCCAAA AACTACAGGA ATACCAAAGA AAAAACCTGA AGTTGTTGAA
ATCAGAATCG GTGGATCATC AGTTGCTGAA AGATTAGCTT ATGCTAAAGA AATCTTAGGC
AAAACACTCG CAATTGGCGA TGTTTTCGAA GCTGGAGAAA TTATCGATAC TTTGGCAATT
ACTAAAGGTA AAGGATTCCA AGGATCAGTT AAAAGATGGG GAATCAAAGT TCAATTTGGA
AAACACCAAA GAAAAGGTGT TGGTAGACAC ACAGGTTCAA TCGGTCCATG GAGACCTAGA
AGAGTTATGT GGACTGTACC ATTACCTGGT CAGATGGGTT TCCACCAAAG AACGGAATAC
AACAAAAGAA TCTTAAAATT AGGCAGCGAA GGCGCTGAAA TTACACCTAA AGGCGGATTC
TTAAACTACG GTGCTGTTAA AAACGGCTAT GTTGTAGTTA AGGGAACTGT TCAAGGTCCT
GCAAAAAGAT TAGTAGTTTT AAGAGGATCT GTAAGAGCTG CTGAAGACAA ATTCGGCTTA
CCAGAAGTTG CTTACATCAG TACAGAATCC AAACAAGGAA ACTAA
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| Protein sequence | MGMKKNRPRR GSLAFSPRKR AKKLVPKIRS WPADKKVGLQ AFPVYKAGTT HALLIENNPK
SPNNGQEVFT PVTVLETPDV TVAGIRLYEK TTKGLKALTE VWAEQLDGDL GRKLTLAKKE
EKKTADALDA VVEKATEVRA IVHTNPKTTG IPKKKPEVVE IRIGGSSVAE RLAYAKEILG
KTLAIGDVFE AGEIIDTLAI TKGKGFQGSV KRWGIKVQFG KHQRKGVGRH TGSIGPWRPR
RVMWTVPLPG QMGFHQRTEY NKRILKLGSE GAEITPKGGF LNYGAVKNGY VVVKGTVQGP
AKRLVVLRGS VRAAEDKFGL PEVAYISTES KQGN
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