| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0016 |
|---|
| Symbol | |
|---|
| ID | 4928237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | - |
|---|
| Start bp | 10140 |
|---|
| End bp | 11039 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640165511 |
|---|
| Product | tetrahydromethanopterin S-methyltransferase subunit E |
|---|
| Protein accession | YP_001096548 |
|---|
| Protein GI | 134045062 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4059] Tetrahydromethanopterin S-methyltransferase, subunit E |
|---|
| TIGRFAM ID | [TIGR01113] N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCCAA CATTGATTTC TCTGGGGGCA TTGGCCCTAG CTGGGGCGGC TGCAACTGTT
TCAGGTTGTG CTGAAGACTT GGAATCCGAT GTCGGTTCAC AGTCAAACCC TAACTCTCAG
GTTCAATTAG GTCCGCAAAT GGGCAATATC CACAGATACT TTAACAAAGC TATATCTGGG
GAACCTGTAT CATACGGTTT GTATGTTGCA GTTGCAGGTA CCATTGCTTG GGCACTAATT
AACGCAGGAT TAAACGCTGT TTTAGCGATA ATCGTAGGTT CAGGTGTTGC TGCAGTCGTA
CACGGTGCAT ACTCAGTTAG TGCATTCCTT GGAAGAACTG TAGGTCAGTC CAAAAAGTTC
GGACAACCTG TTTACATGGA TGTTCTTACA TCACACATAG GTCCAATCGT AGGACACGGA
TTTATAGCTG TTTTCACAAT GACTCTTGCT GCATACTTAG CAACAACAGC ATTAGGAAAC
CCATTCCCAC TACCATTGGT TGCATTAATC TTCGGTATTA CTGTAGGTGC TATCGGTTCA
TCAACTGGTG ACGTTCACTA CGGTGCTGAA AGAGAATACC AAAAATACCC ATTCGGTGGA
GGTATCCCTG TTGCTAACCA AGGTGACATC GATATTTACG CAGAATACGG TGTGAGAAAT
GGTTTAGATT CTTCATATTT CTGTTCAAGA TTTGGTGGTC CACTTACAGG ATTATGCTTT
GGTTTAATTA TCTTCCTCGA TGGATGGAGA AGCATTCTCG GTAACATCAT CGGTGGAGAC
TTAGTAACAA AAACATCAAT CGCACTTTTA GTAGGTCTCT TAGTAGTGGC CGTTGCAGCA
GGTATCAACA GGAAACTCGA GGTATATGCT AGAAACAAAT ACGGACCATA CAGAAATTAA
|
|---|
| Protein sequence | MDPTLISLGA LALAGAAATV SGCAEDLESD VGSQSNPNSQ VQLGPQMGNI HRYFNKAISG
EPVSYGLYVA VAGTIAWALI NAGLNAVLAI IVGSGVAAVV HGAYSVSAFL GRTVGQSKKF
GQPVYMDVLT SHIGPIVGHG FIAVFTMTLA AYLATTALGN PFPLPLVALI FGITVGAIGS
STGDVHYGAE REYQKYPFGG GIPVANQGDI DIYAEYGVRN GLDSSYFCSR FGGPLTGLCF
GLIIFLDGWR SILGNIIGGD LVTKTSIALL VGLLVVAVAA GINRKLEVYA RNKYGPYRN
|
|---|
| |