Gene Mlg_1972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_1972 
Symbol 
ID4268515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp2241207 
End bp2241959 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content68% 
IMG OID638126728 
Producttriosephosphate isomerase 
Protein accessionYP_742804 
Protein GI114321121 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0149] Triosephosphate isomerase 
TIGRFAM ID[TIGR00419] triosephosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0120273 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAGC CGATGGTTGC GGGCAACTGG AAGATGAATG GGTCCCTGGC GCTAGTCAAC 
GACATGGGGC GGGCCCTGGC CGATGTCGAC TGCAGCGCCG TCGACGTGCT GGTTTGCCCT
CCGTTTCCCT ATATCGGGCC GCTGCGCCGC GCGGTTCCGG ACGAGTCCGG CGTGGCGCTG
GGCGGGCAGG ACGTCTCCCG CTACGACTCC GGTGCCTACA CCGGTGAGGT GGCGGGTGCC
ATGCTTGCCG AAATGGGCTG CCGCCATGTC ATTGTCGGCC ACTCGGAGCG CCGGGCCATG
CACGCCGAGA CCGATGAGGT GGTGGTCGAC AAGGTGCAGG CGGCGCTGCG CGCCGGATTG
ACGCCCATCG TCTGTGTCGG CGAGACCCTC GAGGCCCGGG ATGCTGGCGA GACCGAGCAG
GTGGTGGGTC GTCAGTTGGA CGCGGTGCTC GAGTTAGGCG GTTTCGTGGT CGAAAAGCTT
GTCTTGGCCT ACGAACCGGT CTGGGCCATC GGTACCGGCC GCACCGCCAG CCCGGAGCAG
GCTCAGGCAG TGCATGCCTT CATTCGGCAG CGCGCGGCCG ATGCCCTCGG CGACGAGTTG
GCCCAGCGAC TGCCCATCCT CTACGGCGGC AGCGTCAAGC CGGGCAACGC CCGGGAGTTG
TTCGGCTGCG CCGATGTGGA CGGTGGGCTG ATCGGCGGTG CCTCGCTCGA CCCGGACGGC
TTTCTGGAGA TCATCTCTGC GGCGCGGCCC TGA
 
Protein sequence
MRKPMVAGNW KMNGSLALVN DMGRALADVD CSAVDVLVCP PFPYIGPLRR AVPDESGVAL 
GGQDVSRYDS GAYTGEVAGA MLAEMGCRHV IVGHSERRAM HAETDEVVVD KVQAALRAGL
TPIVCVGETL EARDAGETEQ VVGRQLDAVL ELGGFVVEKL VLAYEPVWAI GTGRTASPEQ
AQAVHAFIRQ RAADALGDEL AQRLPILYGG SVKPGNAREL FGCADVDGGL IGGASLDPDG
FLEIISAARP