| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0657 |
|---|
| Symbol | cvrA |
|---|
| ID | 4268269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 718430 |
|---|
| End bp | 720223 |
|---|
| Gene Length | 1794 bp |
|---|
| Protein Length | 597 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638125406 |
|---|
| Product | potassium/proton antiporter |
|---|
| Protein accession | YP_741501 |
|---|
| Protein GI | 114319818 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.0833853 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTGGA TCTATCCGCT CATCCTGATC GGGGCCGGCC TGATCGCCCT CTCGGTGTTC
ACCTCGGTGA TCGCCTTTCG CTTCGGCGCG CCCCTGCTGC TGGTTTTCCT CTGCATCGGC
CTGATCGCCG GAGAGGACGG GCTGGGGTTC GTCTTCAACG ATGCCGATCT GGCCTACCTC
GTCGGCAGCC TGGCGCTGGC CGTCATCCTG TTCGATTCCG GCTTTGGCAC ACCGGTCCAG
ACCCTGCGCC GGGCCGCAGG GCCGGCGATT ATCCTGGCCA CCGTGGGCGT CCTGCTCACC
ACGTTGCTGG TGGGTGTGGC GGCTCACTTC CTGTTTGACC TGCCCTGGCC CTATGCCTTC
CTGATGGGCG CCATCGTCAG TTCCACCGAC GCGGCCGCCG TTTTCTTCCT GCTGCGCGCC
GGCGGGGTGA AGATCTACAA GCGGGTCCGC TCGGTGCTGG AGGTGGAATC CGGCTCCAAC
GACCCCATGG CCATCTTCCT GACCCTGTTC TTCATCGAGT TAATCCTGGC CGGTGGCACC
GAGATGCCGT GGGGCCTGCA GTTTCTGCTC GGCTTCGGCC AGCAGATGGG GCTGGGGCTG
GTCATGGGCC TGGTGGCGGG CTTTCTGATC GTGGAGCTGG TCAACCGTAT CCAGCTGGAG
GAGGCGCTCT ACCCCATCGC CGTGATGGCC ATGGCGCTCT GCCTCTTTGC TGCCACCGGC
TACCTGGGGG GCAGCGGCTT CCTGGCGGTT TACGTGGCCG GGATCGTCGC CGGCAATCGG
GCCATCCGGG GTGCGGCCAA GCTGCGTCAG TACCAGGCCG GTATGACCTG GTTGGCGCAG
ATCATCATGT TCCTGGTGCT GGGGCTGATC GCGACCCCCT CGGAATTCAT CCCGGTGGCC
ATGCCGGCCA TCGCCCTGGG CCTGTTCCTG ATGCTGATTG CCCGTCCGCT GGCCGTCTGG
CTGTGCGTAC TGCCCTTTCG GCTGGAACGG GAGGCCACCA CCTTTCTCTC CTGGGTGGGG
CTGCGCGGGG CCGTCTCCAT CCTGCTCGGG ATACTGCCCA TCGTGGCGGG GGTGGAGAAT
GGCCAACTGT TCCTCAACGT GGCCTTCATC ATGGTGCTCA CCTCGCTGCT GATCCAGGGC
TGGACCATCC GCCCCGCCGC CCGGCGCCTG AACCTGATCG TGCCCGAACA GCTCGGCCCG
GTGGAACGGG TGGAACTGGC CCTGCCCGGC GCGCCGCGCC ACGAGTTGGC GGTTTACCGG
GTTACCGAGG ACAGCCCGGT GGGGAAAGGC GAGCCGCTAC CACGTTGGGC GCGGCCGTCA
CTGGTGGTGC GCAATGAGCA GACCATCCGC TACCAGGATG CCAGCCATCT GCAGCCCGGC
GATTACGTCT ACATCTTCAT CCCACCCGAT TACCTCGGCT TGCTGGACCG GGTGTTCGCC
CGCCCGGTCC CGCCGAGCAA GGACGACCAG GCCTTCTTCG GCGAGTTGCG GATCAACCCG
GACCAGCCCC TCTCCGCGTT GCAGGCGGCC TACGGCGTCG ATTTGGGGGA CCTACCGCCG
GACGAATCCA TTGCCGAGCA CATGCGCCGG GCGTTACAGG GTCGTCCGGT AGTGGGTGAC
CGGGTACCGC TCGGACCGGT GGAACTCATC GTGAGGGCGG TGCGGGACAA GCGCGAAGTC
ACGGACGTGG GCCTGGCCCT CGGGCACCAG GCCGACCCTG AGCAGCCCGG ACACAACCTG
CCCCGCCTGC TACTGGACCT GCTGCGCCCG GGGCGCCGAT CCTCCCGCCC CTGA
|
|---|
| Protein sequence | MDWIYPLILI GAGLIALSVF TSVIAFRFGA PLLLVFLCIG LIAGEDGLGF VFNDADLAYL
VGSLALAVIL FDSGFGTPVQ TLRRAAGPAI ILATVGVLLT TLLVGVAAHF LFDLPWPYAF
LMGAIVSSTD AAAVFFLLRA GGVKIYKRVR SVLEVESGSN DPMAIFLTLF FIELILAGGT
EMPWGLQFLL GFGQQMGLGL VMGLVAGFLI VELVNRIQLE EALYPIAVMA MALCLFAATG
YLGGSGFLAV YVAGIVAGNR AIRGAAKLRQ YQAGMTWLAQ IIMFLVLGLI ATPSEFIPVA
MPAIALGLFL MLIARPLAVW LCVLPFRLER EATTFLSWVG LRGAVSILLG ILPIVAGVEN
GQLFLNVAFI MVLTSLLIQG WTIRPAARRL NLIVPEQLGP VERVELALPG APRHELAVYR
VTEDSPVGKG EPLPRWARPS LVVRNEQTIR YQDASHLQPG DYVYIFIPPD YLGLLDRVFA
RPVPPSKDDQ AFFGELRINP DQPLSALQAA YGVDLGDLPP DESIAEHMRR ALQGRPVVGD
RVPLGPVELI VRAVRDKREV TDVGLALGHQ ADPEQPGHNL PRLLLDLLRP GRRSSRP
|
|---|
| |