Gene Mlg_0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_0058 
Symbol 
ID4270336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp65285 
End bp65803 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content65% 
IMG OID638124783 
Producthypothetical protein 
Protein accessionYP_740905 
Protein GI114319222 
COG category[S] Function unknown 
COG ID[COG3157] Hemolysin-coregulated protein (uncharacterized) 
TIGRFAM ID[TIGR03344] type VI secretion system effector, Hcp1 family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACAC CTTGCTATGT CAGCATCCAG GGCCAGACCC AGGGCAACAT CACTGCCGGT 
GCCTTCACCC CCGACTCCGT GGGCAATATC TACGTCGAGG GCCATGAGGA CGAGATGCTC
GTTCAGGAGG TCAAGCACGT GGTCACCGTG CCCACGGACC CCCAGTCGGG TCAGCCCTCG
GGCCAGCGGG CGCACAAACC GCTGATCCTC ACGGTGGCGC TCAATAAGTC GGTGCCGCTG
CTCTACAATG CCCTGGCCGC CGGCGAGATG CTGCCCGAGG TGGTACTGCG CTGGTATCGC
ACCTCCACCG ACGGCAAGCA GGAGCATTTC TTCACCACCA CCCTCACCGA TGCCACCATC
GTGGACATCG ACCTCACCAT GCCCCACGCC CAGGACACCG CCAAGGCCGA GTTCACCCAG
CTCATGGACG TCAGCCTGGC CTACCGCAAG ATCGACTGGG AGCACACCGT CGCCGGCACC
TCCGGTGCCG ACGACTGGCG CTCTCCGGTG GAGTCCTGA
 
Protein sequence
MPTPCYVSIQ GQTQGNITAG AFTPDSVGNI YVEGHEDEML VQEVKHVVTV PTDPQSGQPS 
GQRAHKPLIL TVALNKSVPL LYNALAAGEM LPEVVLRWYR TSTDGKQEHF FTTTLTDATI
VDIDLTMPHA QDTAKAEFTQ LMDVSLAYRK IDWEHTVAGT SGADDWRSPV ES