| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0049 |
|---|
| Symbol | |
|---|
| ID | 4270918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 53316 |
|---|
| End bp | 54302 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638124774 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_740896 |
|---|
| Protein GI | 114319213 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCCGG GGCATCTCGC CACCCGCGCC CGGCACTACG ATTTCTATCA GCTGGTGGAA
CTGCTCTTCC AGCAATGGGG CTGGCAGCCG GAAGCGGGGA GCGGAAGCGG TCCCCAGGTG
GAAGGGGTGC GCTTCCGGGC CTCCGCGTCG CTGGGTTTTC CCGGCACCGA CGTGGTGGCG
CTGCGGCCCT GCCCGCGGGA GGGCCATATC CTCGAGGTCA GTTTTCTCGG GCTGCACGGC
GCCCAGTCCC CGCTCCCTGG TTACTACCTG GAGCACTTGG CGCACGCCAG TGCTCACGGT
GAGGGGGCGG CCGTTGACCT GCTGAATTTC TTCCACCACC GGTTATTGAC CCTGCTCCAT
TTCGCCTGGC GCAAGTATCG CCACTACGTG CGTTACCAAG ACGGGGCGCG CGACGGCTTC
TCGGCGGCGT TGTTCGCCTT GAGCGGGCTG GCGGACAAGG ACCTGCGGGC GGAAAGCCCG
ATCAACTGGA GCAAGCTGCT GGCGTACGCC GGCCTGGTGG CGGGGCGGTC ACGCTCGCCC
GAGGTGGTGG GCGGCATCCT CGCTCATTGC TTCGACCTGG AGGAGGTGGC GATCGTGCCC
TGGCAGGCGC GGTGGGTGGC GGTGCCCGAC GACCAGCGCA GCCGGTGCGG CACGGCCTGT
ATGAGCCTGA ACCGCGATCT CACCATTGGC GACCGGGTGG TGGACATCAA CGGCAAGTTC
CTGATCCGCA TTGGCCGGTT GTCCCGTCGC CGGATGGCGG ATTTTCTCCC GGATGGGCGG
GATTTCGCTC CGCTAAAGGC CGTGGTCGAT TTCCTGTTGC GCGAGCCCCT GGCCTACGAC
CTGGAGTTGG AGCTGATGAG CGACCAGGTC CGGCCGATGC GTCTCTCCGC GCGGGACCCC
GAGCGACTGG GCTGGACGAC CTTTCTTGAT CCACGAACCG ATGCCATGCG CCGCCAGCGG
CGCGTGCGCC TGCAGATAAG GGGGTAA
|
|---|
| Protein sequence | MSPGHLATRA RHYDFYQLVE LLFQQWGWQP EAGSGSGPQV EGVRFRASAS LGFPGTDVVA
LRPCPREGHI LEVSFLGLHG AQSPLPGYYL EHLAHASAHG EGAAVDLLNF FHHRLLTLLH
FAWRKYRHYV RYQDGARDGF SAALFALSGL ADKDLRAESP INWSKLLAYA GLVAGRSRSP
EVVGGILAHC FDLEEVAIVP WQARWVAVPD DQRSRCGTAC MSLNRDLTIG DRVVDINGKF
LIRIGRLSRR RMADFLPDGR DFAPLKAVVD FLLREPLAYD LELELMSDQV RPMRLSARDP
ERLGWTTFLD PRTDAMRRQR RVRLQIRG
|
|---|
| |