| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_4883 |
|---|
| Symbol | |
|---|
| ID | 4976194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 5204131 |
|---|
| End bp | 5204694 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640459110 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001136137 |
|---|
| Protein GI | 145225459 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00152311 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | TTGTCGGATA ACGACGAATC GCGTCGCGCG GCTGCGATCG AAGCGGCGCT GGACGAGGTT
CAGCAGTGGG GTGTGGATCG GTTCCGGCTC GAAGGGGTCG CGCACCGGGC GAAACTCAGC
CCCGACTACG TACGCCAGAT CTGGGGCAGC GAAACCGAAC TCATCGCCGA GGCCCTGCTG
AGCTACAGCC AGGCCATGAT GGAGCTGCCC GACACCGGTT CTCTGCACGG TGATCTCACC
GGGCTGGCGC TGGCCCTGGC CGACTATCTC AACGAGCCGG TGGGCCGGCG GATCTCCCGG
ATGCTCGTGA TCGACAGCAA GTCTCAGGCC GTCGACCGCG ACACCCGGGC CCGCTTCTGG
ACTGTACGCC GGGCCATCGT CGAGGACATC TTCCGACGCG CAGCCGAGCG GGGAGAACTG
CGCGACGATG TGAGACACAT CGTCGCCTTG CAGTTGCTCA CCTCTCCGCT GCACACCTTC
GCGCTGTACT CCGAGGATCC GATCCCCCCG GAGTACTGCC GCTTGATCGC CGATCTGGTG
ACCCGCGCGA TCCGTGCCGA CTGA
|
|---|
| Protein sequence | MSDNDESRRA AAIEAALDEV QQWGVDRFRL EGVAHRAKLS PDYVRQIWGS ETELIAEALL
SYSQAMMELP DTGSLHGDLT GLALALADYL NEPVGRRISR MLVIDSKSQA VDRDTRARFW
TVRRAIVEDI FRRAAERGEL RDDVRHIVAL QLLTSPLHTF ALYSEDPIPP EYCRLIADLV
TRAIRAD
|
|---|
| |