| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0099 |
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| Symbol | |
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| ID | 5834559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 103313 |
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| End bp | 105130 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641365884 |
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| Product | methanol/ethanol family PQQ-dependent dehydrogenase |
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| Protein accession | YP_001637598 |
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| Protein GI | 163849555 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.850532 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGAGCA TCGTCACCGC GGCAGTTGCT CTTTTTGTCT TTCCACTTTC GCCTGTGGTG
CTCGCACAAG GCGCAACGGT CTCTGGCCGC TCCGAGCATC CCAAGCCCCC GTCGTCAGCG
GCGCCTCGTG ATGACGGCCA GTGGACGATG CCGGCCAAGA ACTTCGCAAG CACTCGCTAC
AGCGACCTCG CCGAGATCAC ACCCGACAGC GTCAAGAACC TGCGCGTCAA CTTCACTTTC
TCGGTGGGGG TGAACCGGGG CCAGGAATCC TCGCCCCTCG TGATCGACGG CACGATGTTC
GTGCTCTCGC CTTATCCGAA CATCCTCTAC GCCCTCGACT TAACAAAGCC CGGCGCGCCG
CTGAAGTGGC AGTACAACCC GAAGCCGGAG GCGGCCGCCC AGGGCGTCGC CTGCTGCGAC
GTCGTCAATC GGGGGCCGAC CTTCGCGGAC GGTCACATCT TCTTCAACAC GCTCGACGGC
AACGTCGTCT CAGTAGACGC CGCGACCGGG CAGGAGGCGT GGAAGACCAA GGTCGGCAAC
ATCCACGTGG GCGAGACCAT GACGATGGCC CCCCTTGTCG CCAGGGGGAA GGTCTTCGTC
GGCAACTCGG GTGGCGAGTT CGGGGTGCGC GGCTGGATCC AGGCGCTCGA CCAACAGAGC
GGGAAGGTCG CCTGGAAGGC CTTCAACACC GGTCCCGATA AGGACGTGCT GATCGGGCCC
GAGTTCAAGC CGTTCTACGA CATGGACAAG GGGCAGGATC TCGGAGTGAA GACCTGGCCG
CCCCAAGCCT GGGAGCAGGG GGGCGGCACC GTCTGGGGCT GGCTGTCCTA CGACCCGGAC
CTCAACCTCC TGTATCACGG CACTGGAAAT CCCGGCCCCT GGAATGCCGA CCAGCGCCCC
GGCGACAACA AGTGGACCTC CGGGATCTTC GCCCGCGACG CGGAGACGGG CCAGGCGCGC
TGGTTCTACC AGTGGAGCCC GCACGACCTG TACGATTGGG ACGGGATCAA CGAGCAGATC
CTCCTCGATA TGACCTGGAA GGGCCAGCCC CGGAAGGTCC TCGTGCGCCC CGAGCGCAAT
GGCTACGTCT ACATCCTCGA TCGGACTACC GGCGAGGTGC TCTCGGCCAA GCCCTTCCAC
GCGATCACCA CCACGACCGG CGTCGATCTC AAGACGGGCC GCCTGCAATA CATTCCCGAG
AAAAAGCCCC AGATGGGCAA GGTGATGCGG GATATCTGCC CGAATGCCTC GGGCGCCAAG
GACTGGAGCC CCTCGGCCTA CTCGCCACGC ACCGGCCTAA TCTACCTGCC GCACACCAAT
CTCTGCATGG ACGAAGAGCA CATGCAGGCG AACTACATCG CCGGCACGCC CTATCTCGGC
TCCGAGACCC GCATGAAGGC GGGCCCTGGC GGGCATCGCG GCGTCTACAC CGCCTGGGAC
GTGGCCCGCG AGCGCGCGGC CTGGTCGATC AAGGAAGAGT TCCCGGTCTG GAGCGGAACG
CTCGTCACCG CTGGCGATAT CACCTTCTAC GGCACCATGG ACGGCTGGTT CAAAGCCGTG
AACGCCCGCA CCGGCGAGGT CGTATGGCAG TTCAAGACTG GCTCCGGGAT CATCGGCCAA
CCCACCACTT ATCGCGGTCC GGACGGGCGC CAGCACGTGG CCATCCTGTC CGGCGTTGGC
GGCTGGCCGG GGGTTGTCGT TTCGGCTGAC CTTGACCCGC GCGACGCAAC CGGCGCGCTC
GGCTTTCTCA ATGCCATGCG GGACCTCAAG AAAGTCACAA CCAAGGGAGG GATGCTGTAT
GACTTCGTCC TTCCTTAA
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| Protein sequence | MRSIVTAAVA LFVFPLSPVV LAQGATVSGR SEHPKPPSSA APRDDGQWTM PAKNFASTRY
SDLAEITPDS VKNLRVNFTF SVGVNRGQES SPLVIDGTMF VLSPYPNILY ALDLTKPGAP
LKWQYNPKPE AAAQGVACCD VVNRGPTFAD GHIFFNTLDG NVVSVDAATG QEAWKTKVGN
IHVGETMTMA PLVARGKVFV GNSGGEFGVR GWIQALDQQS GKVAWKAFNT GPDKDVLIGP
EFKPFYDMDK GQDLGVKTWP PQAWEQGGGT VWGWLSYDPD LNLLYHGTGN PGPWNADQRP
GDNKWTSGIF ARDAETGQAR WFYQWSPHDL YDWDGINEQI LLDMTWKGQP RKVLVRPERN
GYVYILDRTT GEVLSAKPFH AITTTTGVDL KTGRLQYIPE KKPQMGKVMR DICPNASGAK
DWSPSAYSPR TGLIYLPHTN LCMDEEHMQA NYIAGTPYLG SETRMKAGPG GHRGVYTAWD
VARERAAWSI KEEFPVWSGT LVTAGDITFY GTMDGWFKAV NARTGEVVWQ FKTGSGIIGQ
PTTYRGPDGR QHVAILSGVG GWPGVVVSAD LDPRDATGAL GFLNAMRDLK KVTTKGGMLY
DFVLP
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