Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0045 |
Symbol | |
ID | 5835745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 52134 |
End bp | 53255 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641365829 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001637544 |
Protein GI | 163849501 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTGCCAAC GCCCGCCCGC GGTCGTTGGA GACATCGGAT CGCACGAGAG GCCATCTCTC ATTGGCTTGA CTCGCCCCGG AGTCGCGAAG GCGGTCTACC TCACTCTCGT CGAACTGGGC GCCAATTTGG ACGAACTGCT CGCCGAGGCG GGGCTTGATC CTCGGACCTT CGACGGCGGC AGGACCCCTG TCCCATACGC CTCGCTCGGT CGCCTGATCG CTCTGGGAGC CGAGAGGACG GGTTGTCACC ATCTCGGGCT CCTTGTTGGA CAGCGCGCGA CATTGGCCTC GCTCGGGCTG CTTGGCCTGC TCATGCGCCA CTCGGACACC ATCGGCGGCG CTTTGCGGGC TCTTGAAGCG CATGCCGGTG TGCGGAACTG GGGCGCAGTC GTCGGACTCG ATATCGACAG TGAGGTGGCC GTTCTCAGCT ACTGCCCTTA TGGCTCGGAA GCCGAGAGCA CGGCCCTCCA ATCAGAGAGG GCACTCGCCA CAATTACAAA CGTCATTCGG GCGTTGGGTG GCTCTGATGC GGCTCTATTA GAAGTGCTGT TGCCGCGCTC CGCGCCACGC GACACAGCGC CCTACATCAG CTTCTTTCGG GCGCCCGTGC GGTATGACCA AGAAACGGCC GCGTTGGTGT TTCCAACTCT ACTCCTTGAA CGGCGCATCA AGGGGGCGGA CCCGGCAGCC CGCGGGAGAG TTGAGGATCG CATCCGCAAG CTTGAGGCCG AACAGCCTTC CACGCTGAAG GACAAGCTTC GCGAGTACCT CCAAGCCCAG GTGATGCGGC AGCGCTGTAA GGCCGCGCAT GTGGCGCGAC TGCGACTGGT CCCCCCCCGT ACCCTGCGTC GTCGGCTGAA AGCCGAGGGC ACGACGTTCA AGCAAATCGC TAACGAAGCG CAGTTCTCAG TCGCCAAGCA GCTCCTAGCC AATACCAGAA TGAGCATGGC GCAGATCTCG GCGGCCTTGG ATTTCTCCGA GCCCGCTGCC TTTAGCCATG CGTTCCGACG CTGGTCAGGC TTCGCGCCCA GTACATGGCG GCGGGAGCAT CAGTCGAAGT GCCTTGGTCG AGAGCAGGAC GAAAATTCCT ACTCCGCACA GACACAGCAG CCGGTCCGAT AG
|
Protein sequence | MCQRPPAVVG DIGSHERPSL IGLTRPGVAK AVYLTLVELG ANLDELLAEA GLDPRTFDGG RTPVPYASLG RLIALGAERT GCHHLGLLVG QRATLASLGL LGLLMRHSDT IGGALRALEA HAGVRNWGAV VGLDIDSEVA VLSYCPYGSE AESTALQSER ALATITNVIR ALGGSDAALL EVLLPRSAPR DTAPYISFFR APVRYDQETA ALVFPTLLLE RRIKGADPAA RGRVEDRIRK LEAEQPSTLK DKLREYLQAQ VMRQRCKAAH VARLRLVPPR TLRRRLKAEG TTFKQIANEA QFSVAKQLLA NTRMSMAQIS AALDFSEPAA FSHAFRRWSG FAPSTWRREH QSKCLGREQD ENSYSAQTQQ PVR
|
| |