| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0026 |
|---|
| Symbol | |
|---|
| ID | 5831284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 28126 |
|---|
| End bp | 29058 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641365810 |
|---|
| Product | malonate decarboxylase subunit beta |
|---|
| Protein accession | YP_001637525 |
|---|
| Protein GI | 163849482 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0777] Acetyl-CoA carboxylase beta subunit |
|---|
| TIGRFAM ID | [TIGR03133] malonate decarboxylase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.840906 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAC GGATCATCGA CCCCGCGGCC AAGGCCTGGG CGACGAGCTG GTACGAGGCA
AGCGCCCGCG CACGGCTCGA CGGCCTTCTG GATGCAGGCA GTTTTCGTGA GGTCATCGGC
CCCGAGCAGC GCCGGATGAG CCCGCACCTG CCGCTGTTCG ACCTGCCGCG CGCCTTCGAT
GACGGCATGA TCGTCGGTTC GGGCCGCCTC GACGGCAAAC CCGTCCTCGT CGCCGCGCAG
GAGGGCCGCT TCATGGGCGG TGCCTTCGGC GAAGTGCACG GCGCCAAGCT CGTCGGCCTG
CTGCGCGCCG CCCTGGCGCT CAAGCCGGAC GCTGTGCTGA TCCTGTTCGA TACGGGTGGC
GTGCGCCTGC AGGAGGCCAA TGCCGGCGAG ACCGCCATCG CCGAGGTGAT GCGCGCGATC
GTGCAACTGC GCGCGGCCGG CGTGCCGGTG ATCGGGCTGA TCGGCGGCCG GGCCGGGGCC
TATGGCGGCG GCGGCCTAAT CGCGGGCACC TGCTCGCGGC TTGTCGTCTC CGAGGGCGGG
CGCATCTCGG TCTCGGGGCC GGAGGTGATC GAGACCAACA AGGGGGCGGA GGAATTCGAT
TCCCGCGACC GTGCCCTCGT CTGGCGCACC ATGGGCGGCA AGCACCGCCG CCTCACCGGC
GGCGCCGACG CCTATGCCGA CGACACCGTC GCGGCCTTCC GCCAAGCGGC CCTGGACCAG
ATCGGGCGGG CCCCGGCCTT CGACCTCGCC ACGCTGGAGG CGGAGCAGGC GCGGTTGGAA
CAGCGCCTCA CGCGCTTCGG CGATTGCCGC GACGCCACCG AGATCTGGGC GCGGCTCGGG
GTGAACGATC CGGAGGCGGT GCCGGCCCTG ACCACGGCCG ACTTCGACAC CTTGCTCGCC
AGCCTGGGAG AGACGACCCA TGACGCTCGC TGA
|
|---|
| Protein sequence | MSERIIDPAA KAWATSWYEA SARARLDGLL DAGSFREVIG PEQRRMSPHL PLFDLPRAFD
DGMIVGSGRL DGKPVLVAAQ EGRFMGGAFG EVHGAKLVGL LRAALALKPD AVLILFDTGG
VRLQEANAGE TAIAEVMRAI VQLRAAGVPV IGLIGGRAGA YGGGGLIAGT CSRLVVSEGG
RISVSGPEVI ETNKGAEEFD SRDRALVWRT MGGKHRRLTG GADAYADDTV AAFRQAALDQ
IGRAPAFDLA TLEAEQARLE QRLTRFGDCR DATEIWARLG VNDPEAVPAL TTADFDTLLA
SLGETTHDAR
|
|---|
| |