Gene Mext_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0015 
Symbol 
ID5831341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp16005 
End bp16889 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content68% 
IMG OID641365800 
ProductSMP-30/gluconolaconase/LRE domain-containing protein 
Protein accessionYP_001637515 
Protein GI163849472 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCAC CCGTCCATCC CCACACGCCG CGCGTTGCGG TCGCCTGCTG CTGCACCCTC 
GGTGAGGAGG TCGTCTGGGA TGCCCGCGAC GGGTCGTTGC TATGGGTCGA TATCGAGAAC
CCGGCGATCT GGCGGCATTG GCCCGCGAGC GGCGAGACCG TGCGGCTCCC GCTCGACGAG
AAGATCGGCT TCGCCGTTTT GACGCCCGAT CCGGACCGCG TCGTCGCGGG GTTCAAGTCA
GGTGTCGCCG CCCTGCGGCT CTCGGACGGA TCACGGACGC CGCTCGTCCG TCCGGACGAT
TACCCCGCGG GCAATCGGCT CAACAGCGGC AATGCCGGGC CGGATGGCTG GCTCTATTTC
GGCAGCATGG ACGACGCGGA GGAGGCGGAG ACCGGCGGCT TCCACCGCTG GGACGGAGCA
CGGGTCGAGA CGTTCGGCAG CCGTGCTGCC GTGACCAACG GTCCGGTCGT CAGCCCGGAC
GGACGGCGCG TCTACACGAT CGATACGGCG AACGGCCTCG TGCAGGTTCA CGCTCTCGAG
GATGGGCGGA TCGGCGAAGC GCGGCCGCTG ATCCGTTTCG AAGAGGGCTG GGGCAAGCCG
GACGGCCTGA CGCTCGATGC CGAGGATCAC CTGTGGATCT GCCATTACGG CGCGGGCCGC
ATCACCCGTT TCGACCCGGA CGGCCACGTC GCGTACGTCG TGCCGATGCC GACACCGCTC
GTCACGAAAT GCGCGTTCGG CGGTGAAGAC CTCTCGACGC TCTACGTCAC GACCTGTCTT
CGCGGCCGCG ATCCGACGCT CGAGCCGATG GCGGGGCACC TCTACAAAGT CGAAACGGGC
TTTCGTGGCT TCCCGGCTAA TCTTTTGGCG CTGCCGCAAA CCTGA
 
Protein sequence
MTPPVHPHTP RVAVACCCTL GEEVVWDARD GSLLWVDIEN PAIWRHWPAS GETVRLPLDE 
KIGFAVLTPD PDRVVAGFKS GVAALRLSDG SRTPLVRPDD YPAGNRLNSG NAGPDGWLYF
GSMDDAEEAE TGGFHRWDGA RVETFGSRAA VTNGPVVSPD GRRVYTIDTA NGLVQVHALE
DGRIGEARPL IRFEEGWGKP DGLTLDAEDH LWICHYGAGR ITRFDPDGHV AYVVPMPTPL
VTKCAFGGED LSTLYVTTCL RGRDPTLEPM AGHLYKVETG FRGFPANLLA LPQT