Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0006 |
Symbol | |
ID | 5831599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 4936 |
End bp | 6783 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641365791 |
Product | ATP-dependent DNA helicase RecQ |
Protein accession | YP_001637506 |
Protein GI | 163849463 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family [TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.354235 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCTC GCCTCGACGA GGCCCGCGCC GCGCTGAAAA AAACCTTCGG CTACGACGAT TTCCGTCCCG GCCAGGATGA GGTGATCGGC GCCGTGCTCG ACGGAACGGA CGTGTTCGCG GTGATGCCGA CGGGCTCGGG CAAGTCGATG ACCTACCAAT TGCCGGCCCT GGTCGATGCC GGGCTCACCG TCGTGGTCTC GCCGCTGATC GCGCTGATGC ACGATCAGGT GCAGCAGATG CACGCCTTCG GCATCGAGGC GGCGACCCTC AACTCGACGA TCGCGGAGAC GGCGTCGCGG GAGACGTGGC GCAAGATCCG CTCCGGCGAG CTGCGCCTGC TGTTCGTTTC GCCGGAACGT CTGCTGATGG ACGGCTGCAT GGAGGCCCTG CGTGGGGCCG GCGTGCGGCG GCTCGCGGTG GACGAGGCGC ACTGCGTCTC GCAATGGGGC CACGATTTCC GCCCCGAATA CCGCGAGATC GCCCGCGCCC GCGAGGCGCT CGGCAACGTG CAGACCCTGG CGCTCACCGC CACCGCCGAC GCCGCGACCC GCGCCGAGAT CGCCGAGCGG CTGTTTCCGG CGGGGCGGCC CCCGAGAACC TTCGTCCACT CCTTCGACCG GCCCAATATC CGGCTGACCT TCCAGCCCAA GGACAACCCG ACCCGCCAGT TGGAGCGCTT CCTGCGTGAC CGCCGCGCGG AGAGCGGCAT CATCTACTGC TCCTCGCGCA AGCGGGTGGA ACAGCTCGCC GACACGCTCA AGGGGGACGG CTTCAACGCC CTGCCCTATC ATGCCGGGCT CGATCAGGTC ACGCGGGCGA GGAACCAAGA CACCTTCCTG CAGGAGGACG GCGTGGTGAT GACCGCCACG ATCGCCTTCG GCATGGGCAT CAACAAGCCG GATGTGCGCT ACGTCTGCCA CTCCGACATG CCGACCAACA TCGAGGGCTA CTATCAGGAG ATCGGCCGCG CCGGCCGCGA CGGGCTGCCC TCCGACACCC TGACCCTCTA CGGCCTCGAC GACATGGCGC TGCGCCGCCG CCAGATCGAC GAGAAGGAAA TCTCAGAGGA GCGCCGCCGG GTCGAGCGGC GCAAGCTCGA GGCGATGATC GCTCTGTGCG AGGGCGCTGC CTGCCGCCGC CAGTCGCTGC TCGGCTATTT CGGCGAGGCG AGCGAGCGCT GCGGGCGCTG CGATCTCTGC CGCGGCGGCA TCGCCCTCAT CGACGGGACG GTGGCAGCCC AAAAGCTGCT CTCCGCCATC GTCCGCACCG GGCAGCGCTT CGGCGCGGCT TATGTCTGCG ACGTGGTGCA TGGCAAGGAG AGCGAATCCA TCCGTCGTAA CGGCCATGCT GCGCTCAAGA CTTTCGGTGT CGGCAACGAC AAGCCGGTGG CGGCGTGGCG CGCCCTGCTG CGCCAGCTCT TCGCGGCCGG AGCGGTGGCC GAGAACACCG ACGGCTATGG CGGCCTCGTG ATGACCGAGA AGGGCGAGGC CATTCTGTTC GGCCGTGAAA CGATCGAGGT CAGGCCCGAT CCGGAGCCGA AGAAGGCCGA GCCGAGGAGC CGCCGTGCCA CGCCGCGCGA CGACGAGGCG AATGCGCTGA GCGAGGCGGA CGAAGCGCTG TTCCAGCACC TGCGGGGCCT TCGCGCCACC ATCGCGCGGG CGGAAGGCAT CGCCGCCTTC ATGGTGTTCC CCGACCGCAC CCTGATCGAG ATGGCGCGCT CAAAACCCGT CGATCTCTGG GCGCTCCGAA CCGTCCATGG CGTCGGCGAG CGCAAGCGCG AGGCCTATGG CGAGCGCTTC ACCGACACGA TCCGTGAATT CCTGGCCGAC GCGAAGCGCG CCGGCTGA
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Protein sequence | MTARLDEARA ALKKTFGYDD FRPGQDEVIG AVLDGTDVFA VMPTGSGKSM TYQLPALVDA GLTVVVSPLI ALMHDQVQQM HAFGIEAATL NSTIAETASR ETWRKIRSGE LRLLFVSPER LLMDGCMEAL RGAGVRRLAV DEAHCVSQWG HDFRPEYREI ARAREALGNV QTLALTATAD AATRAEIAER LFPAGRPPRT FVHSFDRPNI RLTFQPKDNP TRQLERFLRD RRAESGIIYC SSRKRVEQLA DTLKGDGFNA LPYHAGLDQV TRARNQDTFL QEDGVVMTAT IAFGMGINKP DVRYVCHSDM PTNIEGYYQE IGRAGRDGLP SDTLTLYGLD DMALRRRQID EKEISEERRR VERRKLEAMI ALCEGAACRR QSLLGYFGEA SERCGRCDLC RGGIALIDGT VAAQKLLSAI VRTGQRFGAA YVCDVVHGKE SESIRRNGHA ALKTFGVGND KPVAAWRALL RQLFAAGAVA ENTDGYGGLV MTEKGEAILF GRETIEVRPD PEPKKAEPRS RRATPRDDEA NALSEADEAL FQHLRGLRAT IARAEGIAAF MVFPDRTLIE MARSKPVDLW ALRTVHGVGE RKREAYGERF TDTIREFLAD AKRAG
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