Gene Memar_0438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0438 
Symbol 
ID4848250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand- 
Start bp423276 
End bp423938 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content68% 
IMG OID640115114 
Producthypothetical protein 
Protein accessionYP_001046353 
Protein GI126178388 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.503828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGACT ACATCCCGGT ATCCGGCGTC GTCGCCTGCC ACATCTGTCC CCGGCGCTAC 
TACTTCGAGC GCTCGGAAGA GCACCCGGAG TCTCCGCGCT ACACCGTCTG CAAACAGGTC 
TCGACGCACC TCGGCGAACT CCTCGAGGCG GAGCAGATCT GGCAGGAGAT CCTCTGCGTC 
CTCCCCGAAG CAGCGGAAGA CGTCCGGGAA CTCTTCGATG AATGCGTCGC CGCCTGCAGC 
GAGACCAAAT GGGAGCGGCC CGTCCAGGTC GACCTCGCCG TCGAGTCCGA CACCCTCGGC 
ATCCGCGGAA GAGTCGATAA AATCTTCGAG GACGGCACGT TCGCCGTCAC CCGGTCGAGC 
GCCGCGCCGA AGGCCGGGGT CTACAACACC GACCGGCTCC GGATCGCCTG CTACGTTGCC 
TGCCTCAAGG AGACCCTCGG CCGCCCCGTC GCCGGCGGCT ACGTCGAGTA CGTCGCAAGC 
GGCGTCTGCC GCTACGTCGA GCCGCAGCCC CGCGACCGGC GGGAGATGAT CAAAGCGATC 
CGGGCGGCAA AACGGGTCGT CGCGGGCGAA CTCCCGCCCC GGCCCCTCCG GGCGCCCTGC 
GAGGGCTGCC CGCACCTCGA ACGGTGCACC GCCGGCCCCC GCCGGCTCTC CGACCTCTTC 
TAA
 
Protein sequence
MTDYIPVSGV VACHICPRRY YFERSEEHPE SPRYTVCKQV STHLGELLEA EQIWQEILCV 
LPEAAEDVRE LFDECVAACS ETKWERPVQV DLAVESDTLG IRGRVDKIFE DGTFAVTRSS 
AAPKAGVYNT DRLRIACYVA CLKETLGRPV AGGYVEYVAS GVCRYVEPQP RDRREMIKAI 
RAAKRVVAGE LPPRPLRAPC EGCPHLERCT AGPRRLSDLF